Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0127 ATGTTCAGAGGCAAGCATCACTTACGTGATGATCTCTCTGCAAAACTTGGGGGTTCTGGCAAAGTCTTGATCGGTGGTGAGATAGGCGCAGATCACAACAGAATGGAAGAGAATGAAGGGAGGGGGATGACTTCTATATCCTCCGACTCGGAGCACTCCGCCAACTGCCCCATCTGCTTGGGACCCATCCTTCAGGAATCCTACCTCGACAAATGTTTTCACAAGTTTTGCTTCAATTGCATTTCACGCTGGACCAAGGTGGTTACTGGCAAGCACCATTCTCCACCTTCTTCTGTAAAATGTCCCCTTTGCAAGACAGAAATTTTTTCGATAATTTATGGATTTGATGGAAGTTGTTTTCAACGGCAATATGTAAATGAGGATTTTGGGTATAGTTTTACCTTATCAAGAGCGCAGAGATATAGATTACAATGCTATTACACTGAACCAGGTATCTTAGAGGACATATTCAATATACCACGGTATTGGAAGTCTCGTAAGTATCATCAGCCAAACTGTTGGATTCAAAGTTGGCTCAGAAGGGAAATTCAAGCCCTTATCCAGGAGGAAGACGTTGACATCATTGTGCACCATATTGTGGGAGTAATAAGTGCATCACTTTCATGGAGAGAGCCAAATCGTCGCATTCTGGAAGCGGAAAAGAAACAAGGGGAGTTCAAGTTCACAGTTTCAGAAGCGGCAATGCCCTTCTTAGCTTCAAGGACCGGCAGATTTGTGTACGAGGTGCAACTGTTTCTTGCCTCAGGATTGAATATTGAAGCTTATGATGCAGTTTACATACAGCGATTGGGTTGGAGTTCGGCCGTCATAAACGCGCAGGCGTCTCAGAGTGAACTTATTGATCGCAATGCGGTGACTTCATACTTGTATATATTTGATGCGGACTCTGATGGAAATGAATAG 924 0.4394 MFRGKHHLRDDLSAKLGGSGKVLIGGEIGADHNRMEENEGRGMTSISSDSEHSANCPICLGPILQESYLDKCFHKFCFNCISRWTKVVTGKHHSPPSSVKCPLCKTEIFSIIYGFDGSCFQRQYVNEDFGYSFTLSRAQRYRLQCYYTEPGILEDIFNIPRYWKSRKYHQPNCWIQSWLRREIQALIQEEDVDIIVHHIVGVISASLSWREPNRRILEAEKKQGEFKFTVSEAAMPFLASRTGRFVYEVQLFLASGLNIEAYDAVYIQRLGWSSAVINAQASQSELIDRNAVTSYLYIFDADSDGNE 307
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0127 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 118 IPR013083 -
Lele15g0127 307 Pfam Zinc finger, C3HC4 type (RING finger) 56 104 IPR018957 GO:0046872
Lele15g0127 307 ProSitePatterns Zinc finger RING-type signature. 72 81 IPR017907 -
Lele15g0127 307 ProSiteProfiles Zinc finger RING-type profile. 56 105 IPR001841 -
Lele15g0127 307 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 46 265 - -
Lele15g0127 307 SMART ring_2 56 104 IPR001841 -
Lele15g0127 307 SUPERFAMILY RING/U-box 50 112 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g0127 Lele-ChrLele15 762391 768038 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2286 13 28892746 28894590 Lele15g0127 15 762391 768038 hybridization
Lele14g2219 14 27239408 27247961 Lele15g0127 15 762391 768038 hybridization