Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0123 ATGCATTCTTTCGGCTACAGAGCCAACGCTCTGCTCACCTTTGCTGTCACCATTCTCGCCCTTATGTGCGCCATCGCCTCTTTCTCTGATAATTTCAACTCCCCCACTCCCACCGCCCAAGTCAAGGTGCTAAACATTAACTGGTTTCAGAAGCAGCCAAACGGCAATGACGAGGTCAGCATGACACTGAATATATCAGCAGATTTACAAACTCTCTTCACATGGAACACGAAACAGGTTTTTGTTTTTGTAGCCGCGGAGTACGAAACCCCAAAGAATTCCTTGAATCAGATATCCCTGTGGGATGGAATCATTCCTTCTAAAGAGCACGCAAAATTTTGGATACATACTTCAAATAAGTACCGCTTCATTGACCAGGGAAGCAATTTACGAGGGAAAGAATTCAACTTGACGTTGCACTGGCATGTCATGCCAAAAACGGGAAAAATGTTTGCGGACAAAATAGTAATGCCAGGGTATCGATTGCCTGAGGAATATAGATGA 504 0.4444 MHSFGYRANALLTFAVTILALMCAIASFSDNFNSPTPTAQVKVLNINWFQKQPNGNDEVSMTLNISADLQTLFTWNTKQVFVFVAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNKYRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIVMPGYRLPEEYR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0123 167 Pfam Signal peptidase subunit 1 165 IPR007653 GO:0005787|GO:0006465|GO:0016020
Lele15g0123 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016020
Lele15g0123 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0123 Lele-ChrLele15 748116 751058 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0123 15 748116 751058 Lele16g0134 16 789628 794238 ECH
Lele15g0123 15 748116 751058 Lele15g0123 15 748116 751058 ECH
Lele14g2221 14 27254735 27262592 Lele15g0123 15 748116 751058 hybridization