Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0120 ATGGAAGTCAATACTACAGTGGATGCCATCAAGCCTCATACCGGCATGCACCACCACTTACATCCACAAAATTACCATGACCATGATTCCCAGTTCTCCCCCGAAACCATTCTCATTATCATCGTAGCCGTGGCCTCGGGATTGGTGCTCCTGCTTACAATTTTCCTGATCATATTCATGCTTCGTCGGCTGAAATGCTCCCCCAAGAATTCAACTCTGAATGATAACACAAACGGCACAGCACTTGATGACGCGAGTTGCAGGTTCATGGCTTCCGCCGCAATGAACTTGGGTTCCAGTCCAGCTGTGAAGGGAGGGTGTCTGAGTGGGGGGAGTGTGAGCATGAGCAGGGCAGGAGGATGTAATAATAAAGTAAGAGGAGTGCAAGTGTTCACGTACAAGGAGCTACAAGAGGCTACAGAAGGATTCGGCGAGGCAAATGCGATTGGAAGTGGAGGATCTGATTCCATTTACAGAGGAGTCTTAAGTGATGGCACTCTCGCCGCAATCAAGCTGCTGCGGAGGCAAGGTAGGCAGGGGGAGCGTGACTTCCGAATTGAGGTGGATATGCTAAGCCGCTTGCGCTCTCCATATTTGGTGGAGTTACTTGGGTACAGTGCAGACCAGCAGCACAGATTACTGATATTCGAATTCATTCCCAATGGAACGCTGCATCAGCACCTGCACTCTGTTATGAATCAAGCTAAACCCTTGAATTGGTGGACCCGCTTGAAGATAGCCCTTGATTGTGCCAGAGCTCTTGAATTCCTACACGAGCATGCGGTCCCGCCGGTGATCCATCGTGACTTCAATTGCCACAACGTTCTACTGGATCACAACTTTCGAGCCAAGATCAACGCTCAGATTTCCACGCCTGCGTTAGGGACCACTGGATATCTAGCTCCAGAGTATGCGTGTTCGGGAAAGCTTACCACAAAGTCAGATGTGTACAGCTACGGGGTGGTTCTCTTGGAGTTGCTCACTGGACGTGTGCCAGTTGATATCAAGAGACCTCCTGGAGAACACGTTCTCGTCTCTTGGGCTCTTCCAAGGCTAACCAACGGAGAAAAGCTGGTGGAAATGGTTGACCCAGCTCTGCGAGGACACTACTCCAAGAAGGATCTAATTCAGCCAGAAGCAGATTACAGGCCGCTGATGACAGATGTGGTACAGTCGCTAATACCATTTGTCAGGAACACGAGTGCGGGTTCATTTGGTTCCCCAAAACTTCAGAGACAAACATCCAGTAGCCCAGTCCATCATTAG 1266 0.5 MEVNTTVDAIKPHTGMHHHLHPQNYHDHDSQFSPETILIIIVAVASGLVLLLTIFLIIFMLRRLKCSPKNSTLNDNTNGTALDDASCRFMASAAMNLGSSPAVKGGCLSGGSVSMSRAGGCNNKVRGVQVFTYKELQEATEGFGEANAIGSGGSDSIYRGVLSDGTLAAIKLLRRQGRQGERDFRIEVDMLSRLRSPYLVELLGYSADQQHRLLIFEFIPNGTLHQHLHSVMNQAKPLNWWTRLKIALDCARALEFLHEHAVPPVIHRDFNCHNVLLDHNFRAKINAQISTPALGTTGYLAPEYACSGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNGEKLVEMVDPALRGHYSKKDLIQPEADYRPLMTDVVQSLIPFVRNTSAGSFGSPKLQRQTSSSPVHH 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0120 421 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 219 405 - -
Lele15g0120 421 SUPERFAMILY Protein kinase-like (PK-like) 125 393 IPR011009 -
Lele15g0120 421 Gene3D Transferase(Phosphotransferase) domain 1 219 403 - -
Lele15g0120 421 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
Lele15g0120 421 PANTHER OS01G0750732 PROTEIN 35 400 - -
Lele15g0120 421 Pfam Protein kinase domain 146 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0120 421 ProSiteProfiles Protein kinase domain profile. 143 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0120 Lele-ChrLele15 733931 736316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0120 127 404 Receptor kinase-like Gene Family AT3G58690 54.098 1.02e-114 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele15g0120 Pkinase 2.1e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2293 13 28924378 28926766 Lele15g0120 15 733931 736316 hybridization
Lele14g2223 14 27273329 27275695 Lele15g0120 15 733931 736316 hybridization