Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0116 ATGCCGGCTCTTGCCATATCACACTCCTCCCAATGGCTTTCCTTGAAGCCACTCCTGCTTCCTCACCACTTCCACTATCTACGTCATATCTCAACACCAGCACCATTGTCGCTCTCTGTGTCTTCTTCGCACTTCTCTGCGCTTGCATCGTTGTCGGTCACCTTCTCGAAGAGAACCGGTGGGCCAATGAATCCATCACTGCCCTCCTTCTGCTTGGTTTTGGTTTTGGTACAGGGGCTGTGTTCTGGAGTGGTGGTCTTGCTGGTGACCAAGTTCAGTGACACTGAATTTTTCAAATTCAGCGAAGACTTGTTCTTTCTTTACTTGCTTCCTCCTATCATTTTTAATGCCGGTTTCCAAGTCAAGAAGAAGCAGTTCTTCAAGAATTTTACAAATATTCTGCTGTTTGGAGTCGTTGGAACTGTTATTTCATTCTGCTTCATATCATTTGGTGCCTTTTTTCTGCTCAGGAAGATAGGTCTAAGCTTGGAGGTGCAAGATTACCTAGCCATTGGCGCCATATTCTCAGCAACGGACTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCGTTGTGTTTGGGGAGGGAGTTGTAAATGATGCAACCTCTATTGTACTTTATAATTCAGTCCAGTCCCTTGACTTCAGCAGCATCAGTGCTACTTCAGCCCTGAATTTGTTGGGGACATTCCTTTACCTCTTCCTCACCAGCACTGTCCTTGGTTTATTTGTTGGCCTTTTGAGTGCCTTTACTATTAAAACACTTTACTTTGGAAGGCATTCTACAGATCGTGAAGTTGCCCTCATGATGCTTATGGCTTATTTATCGTACATGATTGCTGAGCTTTTGAGTCTAAGTGGGATTTTGACAATTTTCTTTTGTGGCATTGTCATGTCACACTACACGTGGCACAACGTTACAGAAAGCTCAAGGATAACTACCAAGCATGCTTTTGCAACTATCTCATTCATAGCAGAAACTTTTATATTTGTATATGTTGGCATGGATGCTTTGGATCTTGAGAAATGGAAAACCAGCAACGCAAGTGTAGGGACTTCAATTGCTGTCAGTTCAACTTTCTTGGCGTTAGTGTTGATTGGTAGGGCAGCTTTTGTGTTTCCTATTTCAAACATTAAAAACTGCTTCAAGACACAAGAGAGTTCCAAAATCAATTTCCGATCGCAGTTTATAATATGGTGGGCGGGCCTATTAAGAGGTGCAGTGACTATTGCCTTGTGTTATTACCAGTTTGAAAAGGAGAGTGAGTCAGTTCAAGAATATGCAGTGGTGCTCACCTCCACCATAATCGTCGTATTATTCAGTACTGTGGTGTTTGGTTCCATAACGAAGCCCTTGATTCAGGCAGTGCAGCTGAGGCATTCAAAACCAGCGAATTCTGAATCCACAGAAAATGCGGAGGATTTTAGATTCTTACTCCTTGAAAATGCTGGTCCCAGTGAGCAGGGCAATACTCAAGCAGGCCGGAGGAGAAGCAGCCTAAGTTTACTGATAAGTCATCCGACGTCAACGGTTCACTACTTTTGGAGGAAATTTGACGATAAATATATGAGACCAATATTTGGTGGGAGGGGTTTTGTTCCAGTTGTTCCTGTTTCACCTTCTTCTGATTCTAACGGAGCGACGGACACTCCTCCAGCTCCGGACAATTGA 1692 0.4362 MPALAISHSSQWLSLKPLLLPHHFHYLRHISTPAPLSLSVSSSHFSALASLSVTFSKRTGGPMNPSLPSFCLVLVLVQGLCSGVVVLLVTKFSDTEFFKFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTNILLFGVVGTVISFCFISFGAFFLLRKIGLSLEVQDYLAIGAIFSATDSVCTLQVLSQDETPFLYSVVFGEGVVNDATSIVLYNSVQSLDFSSISATSALNLLGTFLYLFLTSTVLGLFVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFVYVGMDALDLEKWKTSNASVGTSIAVSSTFLALVLIGRAAFVFPISNIKNCFKTQESSKINFRSQFIIWWAGLLRGAVTIALCYYQFEKESESVQEYAVVLTSTIIVVLFSTVVFGSITKPLIQAVQLRHSKPANSESTENAEDFRFLLLENAGPSEQGNTQAGRRRSSLSLLISHPTSTVHYFWRKFDDKYMRPIFGGRGFVPVVPVSPSSDSNGATDTPPAPDN 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0116 563 Gene3D - 164 216 - -
Lele15g0116 563 PANTHER SODIUM/HYDROGEN EXCHANGER 57 534 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele15g0116 563 Pfam Sodium/hydrogen exchanger family 56 460 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele15g0116 563 PRINTS Na+/H+ exchanger signature 133 141 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele15g0116 563 PRINTS Na+/H+ exchanger signature 104 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele15g0116 563 PRINTS Na+/H+ exchanger signature 118 132 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele15g0116 563 PRINTS Na+/H+ exchanger signature 172 182 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele15g0116 563 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 73 480 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0116 Lele-ChrLele15 699806 704761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0116 73 558 Antiporters AT3G05030 58.266 0.0 581
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2298 13 28959309 28964542 Lele15g0116 15 699806 704761 hybridization
Lele14g2230 14 27309579 27312107 Lele15g0116 15 699806 704761 hybridization