Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0097 ATGTCGTATTTCGAAGTCGGTCCTGTTTGGCCGGATGAAATGGCTTTTGATTTAAGTTCCGTTTTTCCGAAATTGCAACTGTTTATGACTTCTGATCATGCTTCCGTGGTCTCCATGAACCTATTTGTGGCACGCCTGTGGTCTTTGCAGTGGCGTAGTCATTTTGCTGATAAGGGGTGGTTTCAGGTGTTAAATCAGGACGAGACGCCTTTACTCTACAGCCTTGTGTTTGGAGAGGGTGTTGTGAACGATGCTACGTCTGTTGTGCTTTTCAATGCAATCCAAAGCTTTGATCTCGACAAACTAGACTCTGGAATTGCTTTAGACTTTCTTGGCAACTTTCTGTACCTGTTTATTGCAAGCACATTGCTCGGTGTTCTGACTGGTCTGCTTAGTGCTTATATTATTAAGAAGCTATATATTGGCAGGCATTCCACGGATCGTGAAGTTGCTCTAATGATGCTGATGGCATACCTTTCCTACATGCTGGCTGAAGTAAGTTTTGGAAAGCGTCATTTAAGGGTTTTCTTGTAG 534 0.4326 MSYFEVGPVWPDEMAFDLSSVFPKLQLFMTSDHASVVSMNLFVARLWSLQWRSHFADKGWFQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLDKLDSGIALDFLGNFLYLFIASTLLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAEVSFGKRHLRVFL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0097 177 Pfam Sodium/hydrogen exchanger family 71 166 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele15g0097 177 Gene3D - 27 93 - -
Lele15g0097 177 PANTHER SODIUM/HYDROGEN EXCHANGER 62 166 IPR018422 GO:0006812|GO:0015299|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0097 Lele-ChrLele15 591748 595288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0097 62 166 Antiporters AT3G06370 83.810 5.53e-54 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2308 13 29015305 29020492 Lele15g0097 15 591748 595288 CCT
Lele15g0106 15 637658 642832 Lele15g0097 15 591748 595288 CCT
Lele16g0116 16 703374 706595 Lele15g0097 15 591748 595288 CCT
Lele15g0097 15 591748 595288 Lele15g0097 15 591748 595288 ECH
Lele13g2316 13 29072845 29079038 Lele15g0097 15 591748 595288 hybridization
Lele14g2251 14 27423399 27428485 Lele15g0097 15 591748 595288 hybridization