Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele15g0093 | ATGGGGTGCGTGATTGGTCGAGAAGTCTCATCTGAAATAACCTCAGAGGTGAAAGAGGAGAGGAATTTGAGTGCTGAATCGAACGGGAAGATAGATGAGAATTCCACGGGGACATCTGAGGGGAAAGTGGTTGAGGTTCAGAACGTTGGCAACCAAAACGAAGAGAAAGATGGTGATGATGGGGCCCAGGTCCAGCAGCCCCGGAGCAGAAGGAGAAGGTCAAAGCCAAACCCAAGGCTAAGTAACCCTCCAAAGCATTTGCGGGGGGAGCAAGTATCAGCTGGGTGGCCCCCCTGGCTTACGGCAGTGTGTGGAGAAGCACTTAGTGGGTGGATTCCGCGGAAGGCTGACACATTTGAGAAAATTGATAAGATTGGGCAAGGGACGTATAGCAATGTTTACAAAGCTAAAGACATGTTGACTGGTAAAATTGTTGCATTAAAGAAGGTTCGATTTGACAATTTGGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTATGTTGCGAAGATTGGATCATCCTAATGTTGTAAAGTTGGAAGGTTTAGTTACCTCAAGAATGTCCTGTAGTTTGTATTTAGTGTTTACTTATATGGAGCATGATTTGGCTGGACTTGCTGCAAGCCCAGGAATCAAGTTTACTGAGCCTCAGGTCAAATGTTACATGCACCAACTATTATCAGGACTTGAGCATTGTCATAACCGTCGAGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGATGGAATACTTAAGATAGCTGACTTTGGATTGGCATCTTTCTTTGATCCTAACCAGAAGCTACCAATGACTAATCGTGTAGTTACCCTTTGGTATCGACCTCCTGAGTTGCTTCTTGGCGCCACAGAATATGGTGTGGGAGTGGACCTTTGGAGTGCAGGTTGCATTTTGGGAGAGTTATTGGCAGGAAAGCCAATTATGCCTGGTCGCACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCCTCAGATGAGTACTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCTTACAAGAGATGCATACGAGAGACATTTAAAGATTTTCCACCTTCTGCACTTACACTTATGGATACTCTTCTTGCACTTGATCCAGCAGAACGGAAGACCGCATCAGATGCCCTGAGAAGTGAGTTCTTCAGCACAGAACCTTATGCCTGTGATCCTTCTAGTCTTCCCAAATATCCGCCAAGCAAGGAAATGGATGCTAAACGACGTGATGATGAAGCGAGGAGACAACGAGCTGCAGGCAAAGCTCAGGTTGACGGTTCAAAGAAACTCCGAACACGTAATCGAGCCAAACCTAATCCTATTCCTGAAGCCAATGCTGAACTTCAATCCAATATTGATAGAAGGCGTCTAATAACTCGTGCAAATGCGAAGAGCAAGAGTGAGAAGTTCCCACCACCACATCAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCACATCATATTGATTCAGATATCGTTCCTCCTGATGTCTCTTTTAGTTCAACCTCATTTACCTATTCAAAAGAACCATTCCAAGCGTGGTCAGGTCCCATTGTTGCTCCCAAGCAGAAGAAACATGCTCCCGGTGATGCAGTGTATTTATCAAAGCAACGTACAAGTGCCCTCAAGGATAAACGTTAA | 1704 | 0.4484 | MGCVIGREVSSEITSEVKEERNLSAESNGKIDENSTGTSEGKVVEVQNVGNQNEEKDGDDGAQVQQPRSRRRRSKPNPRLSNPPKHLRGEQVSAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILMLRRLDHPNVVKLEGLVTSRMSCSLYLVFTYMEHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHNRRVLHRDIKGSNLLIDNDGILKIADFGLASFFDPNQKLPMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKDFPPSALTLMDTLLALDPAERKTASDALRSEFFSTEPYACDPSSLPKYPPSKEMDAKRRDDEARRQRAAGKAQVDGSKKLRTRNRAKPNPIPEANAELQSNIDRRRLITRANAKSKSEKFPPPHQDGQLGFPLGSSHHIDSDIVPPDVSFSSTSFTYSKEPFQAWSGPIVAPKQKKHAPGDAVYLSKQRTSALKDKR | 567 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele15g0093 | 567 | FunFam | probable serine/threonine-protein kinase At1g54610 | 202 | 443 | - | - | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 28 | 51 | - | - | |
Lele15g0093 | 567 | PANTHER | CELL DIVISION PROTEIN KINASE | 117 | 407 | - | - | |
Lele15g0093 | 567 | Gene3D | Phosphorylase Kinase; domain 1 | 106 | 201 | - | - | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 410 | 475 | - | - | |
Lele15g0093 | 567 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Lele15g0093 | 567 | ProSitePatterns | Protein kinases ATP-binding region signature. | 125 | 148 | IPR017441 | GO:0005524 | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 421 | 452 | - | - | |
Lele15g0093 | 567 | FunFam | probable serine/threonine-protein kinase At1g54610 | 106 | 201 | - | - | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 52 | 67 | - | - | |
Lele15g0093 | 567 | SMART | serkin_6 | 119 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele15g0093 | 567 | SUPERFAMILY | Protein kinase-like (PK-like) | 114 | 409 | IPR011009 | - | |
Lele15g0093 | 567 | CDD | STKc_CDK9_like | 119 | 403 | - | - | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Lele15g0093 | 567 | ProSiteProfiles | Protein kinase domain profile. | 119 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Lele15g0093 | 567 | MobiDBLite | consensus disorder prediction | 538 | 567 | - | - | |
Lele15g0093 | 567 | Gene3D | Transferase(Phosphotransferase) domain 1 | 202 | 443 | - | - | |
Lele15g0093 | 567 | Pfam | Protein kinase domain | 119 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele15g0093 | Lele-ChrLele15 | 570962 | 574823 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele15g0093 | 111 | 443 | Core Cell Cycle Gene Families | AT5G10270 | 52.436 | 6.92e-123 | 369 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Lele15g0093 | Pkinase | 5.5e-67 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele15g0093 | 15 | 570962 | 574823 | Lele13g2323 | 13 | 29112465 | 29121024 | CCT | |
Lele15g0093 | 15 | 570962 | 574823 | Lele14g2255 | 14 | 27453701 | 27461704 | CCT | |
Lele15g0093 | 15 | 570962 | 574823 | Lele15g0089 | 15 | 548889 | 556135 | CCT | |
Lele15g0093 | 15 | 570962 | 574823 | Lele16g0099 | 16 | 591726 | 601793 | CCT | |
Lele13g2309 | 13 | 29022590 | 29027132 | Lele15g0093 | 15 | 570962 | 574823 | CCT | |
Lele14g2240 | 14 | 27350822 | 27358848 | Lele15g0093 | 15 | 570962 | 574823 | CCT | |
Lele15g0105 | 15 | 634251 | 635320 | Lele15g0093 | 15 | 570962 | 574823 | CCT | |
Lele16g0114 | 16 | 698369 | 699478 | Lele15g0093 | 15 | 570962 | 574823 | CCT | |
Lele13g2318 | 13 | 29094133 | 29098011 | Lele15g0093 | 15 | 570962 | 574823 | hybridization | |
Lele14g2253 | 14 | 27443859 | 27448047 | Lele15g0093 | 15 | 570962 | 574823 | hybridization |