Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0084 ATGCTTTCGCCGTTGGTTTCTTGGATCTTGGCGTCCTCTCCTTCCTCATCCTCCTCCGAGGAAGAAGATAACTTTGTGGACGACGGAGATCATTACGAGAACGTCGGCGAGAACGAGCATTTCCTCCGCGAAGCCGAGGAGCTTCCTTCAACATCATGCGCTGGTGATACTAAAACCACTCCCGTTGCCCTCGCCACTCCCGGCGCCGACGACTCTTACATTCCCGACACGGACACCGGCTCTAGAAAACGGCGGCGCATCAGCCATTCTTATCCCCGGAGACAACATCAGAGGCTGTGGACGAAGCAAGACGAGATCGAACTCTTGAGGGGATATCTGGGTTATATCAAGCAGAACAGATGGGGCACCACATCTCTCAAAAACGACGTAACATTCTTCCACGATCACATCAGGCCTAAATTGAATACGGATTTCAACAAGAATCAACTCGTCCAGAAGCTTCGAGGATTAAAGAGAAAACACAAGACCGTTTTAGACAGGGTCAACTCCGGCGGGGAAGTTTCGCACAAGAGCCCCCAGGAGGAGGCGATTTTTGACATTTCCCAGAGGATCTGGGGCAAGAATCGAGACAAGGAATCAAGCCCAGATCCTGATGCCGATAATAACGAGGTGAATAGTAAAGAAGACGATGGCGATGCATCGGAGCATTTGAATGAGGAGAAAAAAGATATAAAGAAGCTGATAGAGGAGACGATGAGGTCGTGTTTGTCACCATTGAACAATAGTAATGAAATGGAAGGATCAGGATTGAAGTTGGTGGAACAATACGGAAGTGGAGAAGAAGGCGATGAGAAAGAGAGAGAGCAAAGGATTTTGGAACTGGAAGCTTATCTGAAGCAGTTGGAATTGTTGCAGGATCAAATTAAGGCTAGAATAGAGGAGTTGCGAAACGAAGGAGTATGCTTCCAGCAACCAGGCCATCTTTTATTAACTGTAGGCGTCTGA 966 0.4814 MLSPLVSWILASSPSSSSSEEEDNFVDDGDHYENVGENEHFLREAEELPSTSCAGDTKTTPVALATPGADDSYIPDTDTGSRKRRRISHSYPRRQHQRLWTKQDEIELLRGYLGYIKQNRWGTTSLKNDVTFFHDHIRPKLNTDFNKNQLVQKLRGLKRKHKTVLDRVNSGGEVSHKSPQEEAIFDISQRIWGKNRDKESSPDPDADNNEVNSKEDDGDASEHLNEEKKDIKKLIEETMRSCLSPLNNSNEMEGSGLKLVEQYGSGEEGDEKEREQRILELEAYLKQLELLQDQIKARIEELRNEGVCFQQPGHLLLTVGV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0084 321 MobiDBLite consensus disorder prediction 1 88 - -
Lele15g0084 321 Pfam Protein of unknown function, DUF573 97 193 IPR007592 GO:0006355
Lele15g0084 321 PANTHER BNAANNG10740D PROTEIN-RELATED 16 300 IPR007592 GO:0006355
Lele15g0084 321 MobiDBLite consensus disorder prediction 29 46 - -
Lele15g0084 321 Coils Coil 221 241 - -
Lele15g0084 321 Coils Coil 274 305 - -
Lele15g0084 321 MobiDBLite consensus disorder prediction 1 20 - -
Lele15g0084 321 MobiDBLite consensus disorder prediction 193 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0084 Lele-ChrLele15 496213 498678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0084 50 194 GeBP Transcription Factor Family AT3G04930 43.046 3.26e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele15g0084 DUF573 5.6e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2331 13 29182911 29183831 Lele15g0084 15 496213 498678 hybridization
Lele14g2262 14 27528923 27531908 Lele15g0084 15 496213 498678 hybridization