Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0072 ATGTTCGATGGAGTGCCAGAGCAGTTCCACCAATTCATAGCCCCAAGAAACTCACTTCCTCTTCAACTCTCCTTCCTTCCTTTCGATGCTTATAACCCTTCTCCTCATCACTTGCCCCTCCCACCACCACAACCGCCGCTGCCAAATCTCTTGTCCCCATTGCACCACAAACATGAACAACACGAGCAGCAAGAAACTAGCATGAACTTACAGATTAATGAAAGAGAGCCACGAATGGGTGAGCATAAGGTGATTGATTCCACCTGGACCGACGATGAAGTGTTTGCTCTTTTGAGGATCAGATCTAGCCTCGACGCTTGGTTCCCTGACCTCCCTTGGGAACATGTTTCAAGGAAGCTTGCGGAGCTTGGATTTAAAAGGAGTGCAGAGAAGTGCAAGGAGAAATTCGAAGAAGAAACTAGTTACTTCAACAACATCCATTACACCAAGAACAGCTGTTACCGCTTTATTAGTGAGCTCGAACAGCTTTACCAACAAGAAGAAGCATATCAAATACCCGGGGTCGAGGTTGAGGTCGGATCTCAAGAGAGTAAGCAGATGTCTGAAAAGCCGACTGAGGAACAACACAGGAAGATGGATCACGCATTGGAAGACGGATCGGGAAATGACGCATCATTGACTAAAAGATGTGAGGAAACTGTGAAAATGGTGGGGGCATCAAAGGGCAGGAAGCGAAAGAGGAACGATAAGTTTGAGATTTTGAAGGGTTTTTGCGAGAACATAGTGAATAAGATGATGGCGAAGCAAGAGCACATGCACAATAAGCTGCTGGAGGACATGTTTAAAAGAGACCAAGAGATATTCGCGAGAGGGGAAGCTTGGAAGAAACAGGAGATAGATAGGATGAACAGGGAGCTCGAAATGATGGCGAAAGAGCAGGCTGTTGCGGGCCAAAGGCAAGCCGCCATTATTGATTTGTTGAAGAAAATTTCAGACCATAGCCATTGCCACAAAACAGTATCAGACGATCCCAATCCAAATTCTCTGACTGCTTCTTCCCCGTCGAACTCACAAAACCCTAACCCATGTTGTAATTATACCGGGGAGAACAATCTGGAGCCGCCGCCACGCGTGGTTCTTAATTGTACATGCGAAGGTGCGTCAGATCAAAACCCTGATAGTTCAAGCCAAGTACCCAATCCTTCCTCAATTGATGGTGCTCCAGCACTTACCCAGAACCCTAAGTCAGTCGTTGCCCAGACAAATGGATTGCCCGTAAAAACAGCTTCGACGCATAAAGGCGGGTCAGATAATTCTACATGGAGAGAGAAAGAAGTGGCGGGAAGAAGGTGGCCAAGGGAGGAAGTGGTGGCGCTGATAAACCTGAGATGCAGTGAGAATGAAGAGAGAGAAGGAGGAGGGAGCAGCAGGGTTCCTCTGTGGGAGAGAATATCGGAAGGGATGAGGGAAATGGGGTACAATAGAAGCGCCAAGCGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAGGAAGACGAAGAGTCTGAGTAAGAAAAGGTCGGTGGATTCTAGAACCTGTCCCTACTTCCATCAGCTCACTTCTTTGTATTCTCAAGGGATGCTTCATCAGCTTCATGATCATGATCATCGCCCCTCCCACTCTTCTCAAACTTAG 1641 0.4711 MFDGVPEQFHQFIAPRNSLPLQLSFLPFDAYNPSPHHLPLPPPQPPLPNLLSPLHHKHEQHEQQETSMNLQINEREPRMGEHKVIDSTWTDDEVFALLRIRSSLDAWFPDLPWEHVSRKLAELGFKRSAEKCKEKFEEETSYFNNIHYTKNSCYRFISELEQLYQQEEAYQIPGVEVEVGSQESKQMSEKPTEEQHRKMDHALEDGSGNDASLTKRCEETVKMVGASKGRKRKRNDKFEILKGFCENIVNKMMAKQEHMHNKLLEDMFKRDQEIFARGEAWKKQEIDRMNRELEMMAKEQAVAGQRQAAIIDLLKKISDHSHCHKTVSDDPNPNSLTASSPSNSQNPNPCCNYTGENNLEPPPRVVLNCTCEGASDQNPDSSSQVPNPSSIDGAPALTQNPKSVVAQTNGLPVKTASTHKGGSDNSTWREKEVAGRRWPREEVVALINLRCSENEEREGGGSSRVPLWERISEGMREMGYNRSAKRCKEKWENINKYFRKTKSLSKKRSVDSRTCPYFHQLTSLYSQGMLHQLHDHDHRPSHSSQT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0072 546 FunFam Trihelix transcription factor GT-2 89 145 - -
Lele15g0072 546 MobiDBLite consensus disorder prediction 35 50 - -
Lele15g0072 546 Gene3D - 89 145 - -
Lele15g0072 546 Gene3D - 438 500 - -
Lele15g0072 546 MobiDBLite consensus disorder prediction 322 355 - -
Lele15g0072 546 MobiDBLite consensus disorder prediction 413 433 - -
Lele15g0072 546 MobiDBLite consensus disorder prediction 371 397 - -
Lele15g0072 546 MobiDBLite consensus disorder prediction 328 355 - -
Lele15g0072 546 CDD GT1 436 502 - -
Lele15g0072 546 MobiDBLite consensus disorder prediction 35 65 - -
Lele15g0072 546 PANTHER FI21293P1 56 536 - -
Lele15g0072 546 SMART sant 85 142 IPR001005 -
Lele15g0072 546 SMART sant 434 497 IPR001005 -
Lele15g0072 546 Pfam Myb/SANT-like DNA-binding domain 436 523 IPR044822 -
Lele15g0072 546 Pfam Myb/SANT-like DNA-binding domain 88 160 IPR044822 -
Lele15g0072 546 ProSiteProfiles Myb-like domain profile. 430 495 IPR001005 -
Lele15g0072 546 ProSiteProfiles Myb-like domain profile. 81 140 IPR001005 -
Lele15g0072 546 MobiDBLite consensus disorder prediction 370 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0072 Lele-ChrLele15 438591 440667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0072 1 527 Trihelix Transcription Factor Family AT5G28300 35.294 9.40e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele15g0072 Myb_DNA-bind_4 6.5e-19 CL0123