Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0060 ATGTTTTTGTCGTTCTGTTTTGTTTGGTACTCCGGAAGTAGTGTATGGGTAGTTATTATTGGTGAAGTTAAGCGATATGTGGCAGCTATATTGGAAAATGAGGTAGGTGCGGTGATGGATCAAATACGCGTACAAGCAAGTGTGGATGAGTTGGGTGAAATGAAAACAAAGAATGCGAATGCGAATTCGAATTGGACTATAGCGGCAGAGGCGAAGTGGATTTCCGGGGCCTATCAATCAATTTGTCCATTTTTTGGGGGAAGTGGTTTTTGTGAACCTCCCTTGAGAAAAGGAATATCATTTACAAATTTATTTGTTATATTTTGCACGTACGGAGGGGGGGGGGGAGCGGCGAGTAGGAGGAGGAGGAAGGCCTCCGGAGAGATCTCGTCAGATCGTGACCGAAATCTTCACATTCTCAGCTGCTTTTGGGTCATGGGGATGGAAGTTACTGGCATACATGTTGTGGCCACTAGGCCAAATCGTACCGTAGCGACTTCAAATGGCAGTTCCAATGATAAAGGACATGGTTCTCCCAGAATTGCTGAAGTTAAGCTTGAAACGAAGGATCATGAGTTTGCTGACTTGACTGAGGAGAAGAATGAGAAATCAGAAGCACAGTTGACGGGTGGCAGTAAAAAGCTAAGCTCACCTGCAACAAGATCTACAGCTGTGGAATTGGAACCTACAAGCCACTCTGTTCCACTGTCACCTGATATGGCTGCTGAAAAGAATGGCTCTGACAGGCTGAGTGTTGGTGCTGAAGCTGTTATGACTGGTTTGAACATGTCATCAAATGCTAACAACACACATTCACCAAACTCAACTAAACATTTGCAGACAAACTCGCCTTTTTCATCAAGGAAATCCTTGCTCCATGATGATGATGATAATTGGTCTCTTGCTTCCTCTGCTGCATCTGCCCGCACGGCTAGATCAAGGGTAACTGTAGGTTCTGCCCCCACATTTAGATGCTCGAACCGTGCAGAGAAACGGAAGGAGTTTTATCTGAAGTTAGAGGAGAAACATCGAGCTCTTGAAGAAGAAAAAAACCAATACAAAGCAAGGCAGAAGGAAGAGGAAGAAGCAGCCATCAAGCAGTTAAGGAAGAACTTGGTAATCAGAGCAAAGCCAGTACCGAGTTTCTACTATGAAGGACCTCCTCCCAAGGTTGAACTTAAGAAGCTGCCACTGACTCGGCCTAAGTCACCAAAACTATCAAGGAGAAAGAGCACTGGTGATGCTATCAGCTCATCTTCGGAAGTTTGTTCCCGGCAACAACGCCACAGCCTTGGTAGTAGGAAAGAGGCGTCTAACAGCCCTGTGACTCCAAAAACTAAGCAGCATGTTCTTGGACGTAAGAGCAATGGCAGTTGCGAGAAGTCAAAAGTGGGCAAGGAAGCCAAATCAGCACCTCCTAAAATGACCCAGCAAACAAATGCAGACATATCGGTCCACTGA 1461 0.4559 MFLSFCFVWYSGSSVWVVIIGEVKRYVAAILENEVGAVMDQIRVQASVDELGEMKTKNANANSNWTIAAEAKWISGAYQSICPFFGGSGFCEPPLRKGISFTNLFVIFCTYGGGGGAASRRRRKASGEISSDRDRNLHILSCFWVMGMEVTGIHVVATRPNRTVATSNGSSNDKGHGSPRIAEVKLETKDHEFADLTEEKNEKSEAQLTGGSKKLSSPATRSTAVELEPTSHSVPLSPDMAAEKNGSDRLSVGAEAVMTGLNMSSNANNTHSPNSTKHLQTNSPFSSRKSLLHDDDDNWSLASSAASARTARSRVTVGSAPTFRCSNRAEKRKEFYLKLEEKHRALEEEKNQYKARQKEEEEAAIKQLRKNLVIRAKPVPSFYYEGPPPKVELKKLPLTRPKSPKLSRRKSTGDAISSSSEVCSRQQRHSLGSRKEASNSPVTPKTKQHVLGRKSNGSCEKSKVGKEAKSAPPKMTQQTNADISVH 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0060 486 MobiDBLite consensus disorder prediction 380 486 - -
Lele15g0060 486 MobiDBLite consensus disorder prediction 263 288 - -
Lele15g0060 486 Pfam Targeting protein for Xklp2 (TPX2) domain 322 391 IPR027329 -
Lele15g0060 486 MobiDBLite consensus disorder prediction 454 468 - -
Lele15g0060 486 MobiDBLite consensus disorder prediction 208 230 - -
Lele15g0060 486 PANTHER PROTEIN WVD2-LIKE 3 170 485 IPR044806 GO:0000226|GO:0008017
Lele15g0060 486 MobiDBLite consensus disorder prediction 472 486 - -
Lele15g0060 486 MobiDBLite consensus disorder prediction 263 291 - -
Lele15g0060 486 Coils Coil 332 371 - -
Lele15g0060 486 MobiDBLite consensus disorder prediction 194 245 - -
Lele15g0060 486 MobiDBLite consensus disorder prediction 410 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0060 Lele-ChrLele15 358037 363837 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0060 15 358037 363837 Lele13g2362 13 29337815 29340987 CCT
Lele15g0060 15 358037 363837 Lele14g2293 14 27671211 27673602 CCT
Lele15g0060 15 358037 363837 Lele15g0057 15 343452 345849 CCT
Lele15g0060 15 358037 363837 Lele16g0059 16 375731 378113 CCT
Lele15g0060 15 358037 363837 Lele06g1194 06 7523029 7526549 CCT
Lele15g0060 15 358037 363837 Lele07g1388 07 8443426 8448133 CCT
Lele15g0060 15 358037 363837 Lele08g1188 08 7514363 7517875 CCT
Lele13g2358 13 29319269 29324212 Lele15g0060 15 358037 363837 hybridization
Lele14g2290 14 27655012 27659773 Lele15g0060 15 358037 363837 hybridization