Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0056 ATGGGGACACCTGTAAATATTATTGTAGGGTCTCATGTCTGGGCTGAAGACCCGGATGTATCTTGGATTGATGGAGTGGTAGCAAAAATCACTGGAAAAGATGCAGAAATTGAAACTAGTGATGGAAAAAAGGTTGTCGCAAAATTATCAAAAATATACCCCAAAGATATGGAAGCTCCTGCTGGTGGAGTGGATGACATGACTAAGCTGTCATATTTACACGAGCCCGGGGTCCTGCAGAACTTAAAATCCAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATTGCGATAAATCCATTCCAAAGACTACCTCATATCTATGATGCTCACATGATGCAACAATATAAGGGAGCACCATTTGGAGAACTAAGCCCTCATGTGTTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTATTGAAGGAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATACCTTGCTTACCTAGGTGGTAGGGCTGCTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTTAGGAATAACAACTCCAGCCGTTTCGGAAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGGATCTCAGGAGCGGCAATCCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATTAATGATCCTGAACGGAACTACCATTGCTTCTATCTTCTTTGTGCTGCACCACAGGAGGAAATAGAGAAATACAAATTAGGACCTCCAAAATCATTTCATTACCTTAACCAGTCAAATTGTTATGAACTGGCTGATTCAAGTGATGCTCGTGAGTATCTTGCCACCAGGAGAGCTATGGATATCGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCCGCTATTCTCCATCTAGGTAATATTGCTTTTGCTAAAGGAAAAGAAGTTGACTCATCAGTTCCCAAAGATGACAAAGCCAAATTCCACCTGGCAACAACTGCCGAACTTCTCATGTGTAATGCTGATGCCTTGGAAGATGCTTTATGTAAACGAGTGATGATCACCCCTGAAGAAGTTATAAAGCGAAGCCTTGATCCTCAAAGTGCGGCGATAAGTAGAGATGGCTTGGCTAAAACCATTTATTCTCGGCTATTTGACTGGCTGGTGGACAAGATTAATAGTTCAATCGGACAAGATCCTAATTCCAAATCTTTGATTGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACGAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTCTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTAATTGGAGCTATATTGAATTTGTCGATAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGAATCATCGCTCTCCTTGATGAAGCTTGCATGTTTCCTAAGTCAACACACGAAACATTTGCGAACAAGCTTTATCAAACATTCAAGAATCACAAGCGCTTTATAAAGCCGAAATTGTCTCGATCAGATTTCACCATTTCTCATTATGCTGGCGAGGTGTTATATCAGTCTAATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCCTTTGTAGCAGGACTTTTCCCTCCGCTTCCAGAAGAGTCATCTAAATCTTCCAAATTTTCTTCAATTGCATCTCGTTTTAAGCTCCAACTACAGTCACTAATGGAAACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTCAAGCCTGCAATATTTGAGAATGCCAACATCATGCAACAACTTCGCTGTGGTGGTGTTTTAGAAGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGTCCTTTCTTTGAATTTATAAATCGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGGCAACACCGAAGAAAAGGTTGTTTGCCAAAAGATTCTGGAAAAGATGGAGCTAAAAGGGTATCAGATTGGTAAAACAAAGGTATTCCTGAGAGCTGGTCAAATGGCTGAACTGGATGCACGGAGAGCTCAAGTACTCAGCAATGCAGCAAAAATTATCCAACGGCGCATACGAACCCATCAAGCTCGCAATCATTATCTTCGTTTGCGAATGGCTACCATATACATGCAGTCTGTGTGTAGAGGAAGGCTAGCATGCAAACTCTTTGACAACATGAGAAAGGTGGCTGCTGCTAAGAAAATTCAGAAGAACGTACGCCGATATGTAGCTAGGAAGGCCTATAAAAGACTCCATGCAACAGTACTTACCTTGCAAACGGGTTTAAGGGCAATGGCTGCACGGAAGGAATTCAGATTTAGGAAGCAGTCTAAAGCTGCCATTGCTATTCAGGCTCGGTGGCGATGCCACAAAACTTCATCATATTATAAGAGGCTCAAGAAAGCTGCAATAACTACACAATGCAGATGGAGAGGCCGTGTAGCAAGGAGGGAACTTAGGAAGCTAAAAATGGCAAGTTTCTTTACCATGATTATTCTAAAGTCTGCTGCGAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGACCAACCTAGAAGAAGCCAAAGCACAAGAGATAGCAAAACTGCAGAATTCATTAAAGGAGATGCACGCCAAAGTTGACGAAACCAATGCTTTACTTGTCAAAGAGCGAGAGAATGCAAAGAAAGCTGTTGAAGAAGCCCAAGCGCCTCCTGTTGTTCAGGAAACCCAGGTTCTTGTTGAAGACACACAAAAAATTGAATCACTAACCGCAGAAGTTGAGAGCCTGAAGACCTCACTCCAGTCAGAAAAAGAGAGAGCAGACGACTTTGAAAGAAAATACAATAAAGCCCAAGTCTCTAGTGAAGAAAGGGGTAAAAAATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTACAAGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAATCGGAGAATCAGGTTCTACGTCAACAAGCTGTATCCATGGCACCTAATAAGTTCCTTTCGGGACGCTCCAGATCTATTGTTCAGAGAGGTGCTGAAGGTGGCGTTCATGTTGGAGGGGAAGCAAAGGCACCTTCGGATCTTCATAGCCCATCCATGATTCAGAGGGAACACTACGAAATGGAGGATAGGCCACAGAAGTCACTAAATGAGAAACAGCAGGAGAATCAAGAGTTACTCATCAGATGTATCGCACAACATCTAGGCTTTGCTGGGAACAGGCCAATTGCAGCCTGTATCATATACAAATGCCTCTTGCACTGGCGATCATTTGAAGTAGAGCGTACTAGCGTGTTTGATCGTATAATTCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGACATCTTGGCTTACTGGTTATCGAACGCCTCTACACTTCTCTTGCTACTCCAGCGAACACTCAAGGCAAGTGGCGCCGCTGGAATGGCTCCGCAACGCCGTCGATCTTCATCAGCGACACTATTTGGGAGGATGACACAAAGTTTCCGCGGAGCACCATCGGGAGTCAACCTTGCCCTAATCAACGGTAGCGGCGGTGTAGATACATTGCGACAAGTTGAAGCCAAGTACCCAGCTCTTCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGGATGATTCGAGATAACTTGAAGAAAGAGATATCTCCCTTGCTTGGGTTATGCATCCAGGCACCGAGAACATCAAGAGCAAGCTTGGTTAAAGGACGCTCTGTTGCAAACACGGAAGCCCAGCGAGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTCGGGAACTTCCTCAATACTTTAAAAGCAAACCATGTTCCTCCATTTTTAGTTCGGAAGGTGTTCACTCAAATTTTTTCTTTTATCAATGTCCAGCTATTCAACAGTCTTCTTTTAAGACGCGAGTGCTGCTCATTCAGCAATGGGGAATATGTGAAGGCTGGTTTGGCGGAATTGGAGCACTGGTGTTATAAAGCAACGGACGAGTATGCAGGTCTCTCCTGGGATGAGCTCAAACATATTAGGCAGGCCATTGGGTTCCTGGTCATACATCAGAAACCAAAGAAAACGCTGGATGAAATAAGTCATGACCTGTGCCCGGTGCTGAGTATACAGCAGCTATATCGGATAAGTACCATGTACTGGGATGACAAATATGGCACTCATAGCGTGTCCGCCGAGGTAATATCCAATATGAGAGTGCTCATGACTGAAGATTCAAACAACGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCCAGTATTCCATTTTCGGTTGATGACTTATCAAAGTCAATGGAGCAAATAGACATCACGGATATTGAACCGCCACCACTGATCCGAGAGAACTCTGGCTTCAGTTTCTTGTTGCCACGCATAGATTGA 4623 0.4246 MGTPVNIIVGSHVWAEDPDVSWIDGVVAKITGKDAEIETSDGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVIEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGPPKSFHYLNQSNCYELADSSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFAKGKEVDSSVPKDDKAKFHLATTAELLMCNADALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRSDFTISHYAGEVLYQSNQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEESSKSSKFSSIASRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFINRFGLLAPEAMEGNTEEKVVCQKILEKMELKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRIRTHQARNHYLRLRMATIYMQSVCRGRLACKLFDNMRKVAAAKKIQKNVRRYVARKAYKRLHATVLTLQTGLRAMAARKEFRFRKQSKAAIAIQARWRCHKTSSYYKRLKKAAITTQCRWRGRVARRELRKLKMASFFTMIILKSAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEIAKLQNSLKEMHAKVDETNALLVKERENAKKAVEEAQAPPVVQETQVLVEDTQKIESLTAEVESLKTSLQSEKERADDFERKYNKAQVSSEERGKKLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIVQRGAEGGVHVGGEAKAPSDLHSPSMIQREHYEMEDRPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPSGVNLALINGSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGLSWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSAEVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKSMEQIDITDIEPPPLIRENSGFSFLLPRID 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0056 1540 CDD MYSc_Myo11 76 720 IPR036018 -
Lele15g0056 1540 Gene3D - 439 623 - -
Lele15g0056 1540 CDD MyosinXI_CBD 1125 1506 IPR037975 GO:0007015
Lele15g0056 1540 PANTHER MYOSIN 54 1471 - -
Lele15g0056 1540 MobiDBLite consensus disorder prediction 1009 1034 - -
Lele15g0056 1540 FunFam unconventional myosin-Va 737 784 - -
Lele15g0056 1540 Coils Coil 888 968 - -
Lele15g0056 1540 Gene3D - 252 310 - -
Lele15g0056 1540 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Lele15g0056 1540 SMART DIL_2 1358 1465 IPR002710 -
Lele15g0056 1540 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 Gene3D - 833 881 - -
Lele15g0056 1540 Gene3D - 734 785 - -
Lele15g0056 1540 Gene3D - 786 832 - -
Lele15g0056 1540 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Lele15g0056 1540 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lele15g0056 1540 FunFam Myosin heavy chain 252 307 - -
Lele15g0056 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 881 IPR027417 -
Lele15g0056 1540 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Lele15g0056 1540 FunFam unconventional myosin-Va 833 881 - -
Lele15g0056 1540 Coils Coil 981 1064 - -
Lele15g0056 1540 ProSiteProfiles IQ motif profile. 854 881 IPR000048 GO:0005515
Lele15g0056 1540 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 SMART iq_5 782 804 IPR000048 GO:0005515
Lele15g0056 1540 SMART iq_5 757 779 IPR000048 GO:0005515
Lele15g0056 1540 SMART iq_5 830 852 IPR000048 GO:0005515
Lele15g0056 1540 SMART iq_5 734 756 IPR000048 GO:0005515
Lele15g0056 1540 SMART iq_5 805 827 IPR000048 GO:0005515
Lele15g0056 1540 SMART iq_5 853 875 IPR000048 GO:0005515
Lele15g0056 1540 FunFam Class V myosin 439 575 - -
Lele15g0056 1540 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Lele15g0056 1540 FunFam unconventional myosin-Va 785 832 - -
Lele15g0056 1540 Pfam DIL domain 1359 1462 IPR002710 -
Lele15g0056 1540 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 FunFam Myosin 2 312 426 - -
Lele15g0056 1540 Gene3D - 667 733 - -
Lele15g0056 1540 ProSiteProfiles Dilute domain profile. 1174 1483 IPR002710 -
Lele15g0056 1540 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Lele15g0056 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 785 IPR027417 -
Lele15g0056 1540 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Lele15g0056 1540 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Lele15g0056 1540 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Lele15g0056 1540 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Lele15g0056 1540 Pfam IQ calmodulin-binding motif 833 852 IPR000048 GO:0005515
Lele15g0056 1540 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele15g0056 1540 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0056 Lele-ChrLele15 331728 341994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0056 1 1540 Myosins gene family AT1G54560 83.787 0.0 2692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0056 15 331728 341994 Lele13g1895 13 26716916 26719753 CCT
Lele15g0056 15 331728 341994 Lele14g1833 14 25068165 25071046 CCT
Lele15g0056 15 331728 341994 Lele15g0513 15 2998325 3001155 CCT
Lele15g0056 15 331728 341994 Lele16g0533 16 2950334 2953194 CCT
Lele15g0056 15 331728 341994 Lele15g0056 15 331728 341994 ECH
Lele13g2363 13 29343130 29352612 Lele15g0056 15 331728 341994 hybridization