Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0038 ATGGAGAAAGCATCAGCCTTTCTTTTGTTGGCTTCTTACGTCGTCGTCTCCGTTTCTGCTATCGATAGTGACTATGCGCAGTGCAATTGTGACGAAGAAGGGCTTTGGAGCATACATAACATTCTAGAGAGCCAAAGAGTTAGTGACTTCTTTATTGCCATAGCATATTTTTCGATCCCCGTAGAACTCCTCTACTTCGTTAGTCGCTCCAACCTTCCCTTCAAATGGGTGTTCCTTCAATTCATTGCATTCATAGTTCTTTGTGGCTTGACGCATTTACTTAATGCATATACTTATTACGGACCTCACTCCTTCCAGTTGGTGCTCTCCCTTACAATTGCTAAACTCCTCACAGCCCTGGTCTCTTGTGCAACTGCAATTACCCTTTTTACTCTGATTCCTCTTCTTCTCAAAATCAAAGACGATGATTTTTTGGGAATATGGAGATCAGGCGTGCAAAATGATAATGTATATATAAAATTTGATTTTCGGATAACTGGTACAAGTTCACGGTCAGATGAATCAACTTCAACAAGACACTATGCTGGTGGAAGGCACTACGGCACTGAACCTAATGAGGGCCTAAGCTTCAGAATGTGTAAAACGCTGGCACAGATGATGCAAGGCAATATCTGGTTATCGCCAAACGCTCTAGGTTTGGCACAGAGCTTGACACTTGCTCTCAAGTTTGAGATAGGGGGGCCATCTCACGGAAGATCCATTTTAGCACGTAAAGATTCTCTGGACTCTCGGTTCAGAGGCCTCAAGGTTGTGTTAACGGACGATGATAATGTAAACAGGACAGTGACGAAGAAACTTCTTGAGAAGTTGGGTTGTCAAGTAACTGCTGTTTCATCAGGGTTCGAATGCCTGGGCGCAATAAGTGCATCCGGTAACACATTCAAGGTCATCCTTATGGATCTGTACATGCCTGAGATGGATGGTTTTGATGTGGCGATGAGGATACGGAAGTTCCACAGCCGCAACTGGCCCTTGATTATAGCTCTTACGGCAAGTGCAGAAGAAGATGTGATGGATAGATGCCTACGGGTTGGGATGAATGGATTAATTCGAAAACCTATTCTTCTCCAAGAGATAGCAGATGAACTTAGAAGAGTCCTGCAACGCGCAGGCGAAAATTTGTGA 1146 0.4398 MEKASAFLLLASYVVVSVSAIDSDYAQCNCDEEGLWSIHNILESQRVSDFFIAIAYFSIPVELLYFVSRSNLPFKWVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLVLSLTIAKLLTALVSCATAITLFTLIPLLLKIKDDDFLGIWRSGVQNDNVYIKFDFRITGTSSRSDESTSTRHYAGGRHYGTEPNEGLSFRMCKTLAQMMQGNIWLSPNALGLAQSLTLALKFEIGGPSHGRSILARKDSLDSRFRGLKVVLTDDDNVNRTVTKKLLEKLGCQVTAVSSGFECLGAISASGNTFKVILMDLYMPEMDGFDVAMRIRKFHSRNWPLIIALTASAEEDVMDRCLRVGMNGLIRKPILLQEIADELRRVLQRAGENL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0038 381 SUPERFAMILY CheY-like 252 376 IPR011006 -
Lele15g0038 381 SMART REC_2 255 370 IPR001789 GO:0000160
Lele15g0038 381 CDD REC_ETR-like 255 370 - -
Lele15g0038 381 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 153 377 - -
Lele15g0038 381 Pfam Response regulator receiver domain 257 369 IPR001789 GO:0000160
Lele15g0038 381 FunFam Ethylene receptor 253 377 - -
Lele15g0038 381 Gene3D - 255 380 - -
Lele15g0038 381 ProSiteProfiles Response regulatory domain profile. 256 374 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0038 Lele-ChrLele15 226273 230217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0038 146 379 Miscellaneous Gene Families AT3G04580 52.066 1.36e-78 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele15g0038 Response_reg 2e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2382 13 29439965 29443886 Lele15g0038 15 226273 230217 hybridization
Lele14g2312 14 27795639 27799635 Lele15g0038 15 226273 230217 hybridization