Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2314 ATGGCTTCTCTCTCTTGCTCCGCCGCTGACCTTGCCCCACTCCTCACCGCCACCCCCAACGCAACCGGCGCTGCCACCTACCTCTGTTCCCAACTCCAAGCCATATCCGCCAAGCTAAGTGACACCGCCTATGCCGTCAACAACACCTACCTTCTGTTCTCCGCGTATCTGGTGTTCGCCATGCAACTCGGTTTCGCCATGCTGTGCGCCGGTTCCGTGCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTGCTCGATGCTGCCGCCGGCGTCCTCTCTTACTATCTGTTTGGTTTTGCCTTTGCATTCGGGTCCCCCTCCAACGGCTTCATCGGTCGCCACTTCTTTGGCCTCCGACACTTCCCTTCCCCATCCGGAGACTATGGCTTCTTCCTCTATCAATGGGCTTTTGCCATAGCGGCCGCTGGAATCACCAGCGGCTCCATTGCTGAGAGAACCCAATTCGTGGCTTACCTCATCTACTCCTCTTTTCTCACCGGCTTCGTTTACCCCGTCGTTTCCCATTGGTTCTGGTCCACTGACGGGTGGGCCAGCCCCACTCGGGCCGGTAGCCTTTTATTTGGGTCCGGTGCCATTGACTTCGCCGGTTCGGCCGTGGTACACATGGTGGGCGGCATAGCAGGGTTATGGGGTGCCTATTTGGAAGGGCCAAGAATTGGGCGATTCGACCGGACGGGCCGGTCTGTTGCCTTGCCGGGGCACAGCGCCTCCCTAGTTGTGTTGGGGTCCTTCTTGTTATGGTTCGGGTGGTACGGGTTTAACCCGGGCTCATTCCTGACGATCTTGAAGGGATATGGAGGGGGTGGGAATTATTATGGTCAATGGAGTGCGATAGGCAGGACCGCCGTGACGACGACATTGGCTGGGTGCACGGCGGCGCTGACCACCTTGTTTGGGAAACGCTTATTGGCGGGACACTGGAACGTGATAGACGTGTGCAATGGGTTGCTCGGGGGATTTGCGGCGATAACGTCCGGGTGCTCCGTTGTAGAGCCATGGGCGGCGATCATATGCGGCTTCGTGGCGGCATGGGTGCTGATGGGGCTGAACAAGCTGGCGGCGAGGTTGGAATACGACGACCCGCTGGAGGCGGCGCAGTTGCACGGAGGGTGCGGAGCGTGGGGATTGCTGTTCACGGGACTGTTGGCGAAGAAGGAATACGTGGAGGATGTGTACGGAGGAGGGAGGAAGTACGGGCTGCTGATGGGAGGGGGAGGGAGGCTGCTGGCGGCGCAGGTGGTGGGGATAGTGGTGGTGTGCGGGTGGGTGACGGCGACGATGGGGCCGCTGTTTTACGTGCTGAATAAGATGAAGCTGTTGAGGATATCGAAGGAGGACGAGATGGCGGGAATGGATCTGACGAGGCATGGAGGCTTTGCTTATGCTTATCACGACGAAGACGAAAGCGTGAGGCCTGCTGGCTTCATGATGGGCAAGATCGAGCCTTCAAATTCCCTGGCCACCACTCCCACCCCATAG 1506 0.589 MASLSCSAADLAPLLTATPNATGAATYLCSQLQAISAKLSDTAYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGVLSYYLFGFAFAFGSPSNGFIGRHFFGLRHFPSPSGDYGFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSTDGWASPTRAGSLLFGSGAIDFAGSAVVHMVGGIAGLWGAYLEGPRIGRFDRTGRSVALPGHSASLVVLGSFLLWFGWYGFNPGSFLTILKGYGGGGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLLAGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIICGFVAAWVLMGLNKLAARLEYDDPLEAAQLHGGCGAWGLLFTGLLAKKEYVEDVYGGGRKYGLLMGGGGRLLAAQVVGIVVVCGWVTATMGPLFYVLNKMKLLRISKEDEMAGMDLTRHGGFAYAYHDEDESVRPAGFMMGKIEPSNSLATTPTP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2314 501 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lele14g2314 501 Pfam Ammonium Transporter Family 50 470 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele14g2314 501 FunFam Ammonium transporter 28 484 - -
Lele14g2314 501 Gene3D Ammonium transporter AmtB like domains 24 484 IPR029020 -
Lele14g2314 501 PANTHER AMMONIUM TRANSPORTER 25 466 - -
Lele14g2314 501 SUPERFAMILY Ammonium transporter 44 451 - -
Lele14g2314 501 TIGRFAM amt: ammonium transporter 47 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2314 Lele-ChrLele14 27808217 27809722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2314 2 501 Inorganic Solute Cotransporters AT1G64780 78.346 0.0 786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2314 14 27808217 27809722 Lele15g0037 15 221080 223949 hybridization
Lele14g2314 14 27808217 27809722 Lele16g0037 16 237721 242791 hybridization