Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2313 ATGATGATGACTTTCGTGCCTGCTTTTGGTGAGCGCAAATATGACTGGGAGAAGAAACAGAGATTTGCTCTCTCAGCAACGGAGGTTGGTTCTTTGATAAGCTTGGGCCCCACAGATTCCTGCGAATTCTTTCACGACCCTGCAATGTTATCAAGGTTGGTTTCTGTTGAAAGTTGGTCTGAAGTAGGCCTTTTAATGCCGGTCAAGTCAGGAAGAGCTTATCAATTAAGCCACTTGCAGGCAGCTCTGGTTACTTTATGTCTTTGTGTAAGGCCCTATATTTTTGGCTTTGATGCTCATGTAATGCATCTCATACGCTTACCAGTGCATCAACCTCTTTTGGCAGCTGTTGTCAACAACATTTTAAAAACCAAAGAATACTTGTCTGTTCCAGTCACAACTGCTGAGTTTGCTGTGATGAAGACTGCTTGCAGCTTGAATCAGTTTGCATTGCCGCACATTATGGGTTGGGATCGTCTGACTCATGATCAGTCCAGAGAAATGCTTGGTCATCAGTCAAAGGTGGACCCGCAAGTTCTAGACTTGGAGTGGGCAAAGTTCTGGCTTTTTGTCACCGAACGCCATGTGATGTTAGGAACAGGAGAAGAAAATTTGATTTCTGGGAAATTGGAAGCGGAAGAGACTGGTTATTTGGTGAGGTGGGAAGTGAAGGTCATCAATCCTGTTCAATGTCTCGAGATGCTTCCAATTCCTTTTCTGGGCTGGGCTATACCTGGTTGGGCCCATGCTGTTTGA 756 0.4497 MMMTFVPAFGERKYDWEKKQRFALSATEVGSLISLGPTDSCEFFHDPAMLSRLVSVESWSEVGLLMPVKSGRAYQLSHLQAALVTLCLCVRPYIFGFDAHVMHLIRLPVHQPLLAAVVNNILKTKEYLSVPVTTAEFAVMKTACSLNQFALPHIMGWDRLTHDQSREMLGHQSKVDPQVLDLEWAKFWLFVTERHVMLGTGEENLISGKLEAEETGYLVRWEVKVINPVQCLEMLPIPFLGWAIPGWAHAV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2313 251 Gene3D Transcriptional Coactivator Pc4; Chain A 1 175 IPR009044 GO:0003677|GO:0006355
Lele14g2313 251 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 1 51 IPR013742 GO:0003697|GO:0006355|GO:0006952
Lele14g2313 251 SUPERFAMILY ssDNA-binding transcriptional regulator domain 117 171 IPR009044 GO:0003677|GO:0006355
Lele14g2313 251 SUPERFAMILY ssDNA-binding transcriptional regulator domain 1 51 IPR009044 GO:0003677|GO:0006355
Lele14g2313 251 Pfam Whirly transcription factor 1 51 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2313 Lele-ChrLele14 27803063 27805497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2313 1 186 Whirly Transcription Factor Family AT1G71260 47.895 6.58e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Lele14g2313 Whirly 5.1e-20 CL0609