Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2302 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACCGAGGATGAAATCCTCAAAGCAGCTGTCATGAAATATGGTAAAAACCAGTGGGCTCGAATCTCTTCGCTTCTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGATGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAATGGACAAGAGAAGAGGATGAAAAGCTTCTTCATCTTGCTAAGCTTATGCCAACACAGTGGAGAACAATTGCTCCAATTGTAGGCCGTACCCCTTCCCAGTGCCTTGAACGGTATGAGAAACTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAGTTGCGACCTGGTGAGATTGACCCAAACCCTGAGTCAAAACCTGCACGACCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCTGAAGCACGAGCTAGGTTAGCCAACACCAAGGGTAAGAAGGCAAAACGGAAAGCCAGGGAGAAACAACTAGAAGAAGCCAGGAGGCTTGCCTCTTTACAAAAGAAAAGAGAATTGAAGGCTGCTGGAATTGATATCAGGCAGCGGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATCCCATTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACCGGTGGAACAGCCCAAGTTCCCTACTACAATTGAAGAACTTGAGGGAAAAAGAAGGATCGATGTGGAGGCACAGTTAAGAAAGCAAGACAGTGCAAAGAATAAGATTGCACAAAGGCAAGATGCCCCCTCTGCTATACTGCATGCCAACAAGCTCAATGACCCAGAAACAGTTAGAAAAAGGTCAAAATTGATGCTTCCACCACCCCAAATTTCTGATAATGAATTAGAAGAAATTGCAAAGATGGGTTATGCTAGTGACCTTGTGGGGAGTGAGGAAATTGCTGAAGGTAGTGGTGCAACACGTGCTCTTCTGGCTAATTATGCTCAGACCCCTAGCCTGGGAATGACTCCTTTGCGAACTCCCCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCAAGGTTGAGGGAGTCTCAGACACCATTGTTGGGAGGAGATAATCCGGAGTTGCATCCTTCAGACTTTTCTGGGGTCACTCCTAAGAAAAAAGAAATTCAGACTCCAAACCCTATGTTGACTCCCTCTGCAACGCCTGGAGGTGCAGGCCTCACCCCTAGAAGTGGTATGACACCAGCAAGGGATGGCTTTTCTTTTGGCATGACTCCTAAGGGAACTCCTCTTAGAGATGAGCTTCATATCAATGAAGACATGGATATGCATGAGAGCACAAAACTTGAGCTACGTAGACAAGCTGATCTCACAAGAAGCTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCAAAAAATGAGTACCAGATAGTTATGCAGCCTGCTCCAGAAGATGTTGAAGAACCTGAGGAAAAGATTGAAGAGGATATGTCTGACAGAATAGCTCAAGAAAAAGCTGAAGAAGAAGCTCGGCAACAAGCATTACTTAGAAAACGATCAAAGGTCCTTCAAAGGGAGCTTCCTAGGCCTCCTGCTGCATCATTGGAACTGATAAGAAATTCTTTGATTAATGCTGATGGGGATAAGAGTTCCTTTGTTCCTCCTACTTCTATTGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTAAGCTTACTGGAACATGACAATGCCAAGTACCCACTTGAGAAAGTTAATGAGAGGAAAAAAAGAGTCAAGCGTGCTGCAAATGGATCTGCTGTTGTCCCTCTGATTGAAGATTTTGATGAAGATGAAATGAAAGATGCTGATCAGTTGATAAAGGAGGAAACTCAGTATCTGCGTGTAGCAATGGGACATGAAAATGAACCCCTTGATGAATTTGTTGAAGCACATAGAACTTGCCTTAGTGGTCTTATGTACTTCCCTACACGTAATGCCTATGGGCTCTCAAGTGTTGCTGGAAACATGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAAAAGGTTGGATGATGGCAAGGAGAAGGCAGTGCGCCTTGAGAAGAAGGTGATGGTTCTTACACAAGGCTATGAGATGAGGGCAAAGAAAAGTCTTTGGCCACAAATCGAAGCCACATTCAAGCAGATGGACACTGCTGCAACAGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCAGTTAGCTGCATCGCATCGGATAAACAATATATGGGCTGAAGTGAAGAATCAAAAGGAACTTGAGAAAACCTTACAAAAGAGATACGGGGATCTTCTGGCAGAAGTGGAAAGGATTCAAAACATTATGAACCAATACAGGGCGCATTCTAACCAAGAAGAAGAAGCTGCTGCTGAGAAGCGTTCTCTTGAGTCGGCTGAGACATCTGATGAAACGAGGATGCGGGATATAGGGAATCATGAAAGTATATCCCACTCGGATGAGCATGGAAGTTCTAAGTCAGTTAATTCAACACACGATGAAACTTCGGTACAGCTACAAGCCGAGGCCACACCCGGCCTCAAAAACGATATGGATGCGGATTCTGATTTAGAGCAAATTCACGATGCTGATGTCAAACTACAAGATGTGACACGCGTTGCAGAGGAGGGGGTCAGTGCAACTTTAGTACCAGATAAGAGCATCGATAGTTGTATTGCCGACAGGGAGACCACTCTAGACACGGGTGCTCCAGAGGATACACGTATTGAGAGAGGTGGGGGGGATCAAGATTTGAAGAATCCAGATAATGCGGCCATAGGCTCACATGATGGCAAAATACCTGAAACCCCTGATCTGGATTAG 2898 0.4486 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDSAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDNELEEIAKMGYASDLVGSEEIAEGSGATRALLANYAQTPSLGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMDMHESTKLELRRQADLTRSLRSGLSSLPQPKNEYQIVMQPAPEDVEEPEEKIEEDMSDRIAQEKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLINADGDKSSFVPPTSIEQADEMIRKELLSLLEHDNAKYPLEKVNERKKRVKRAANGSAVVPLIEDFDEDEMKDADQLIKEETQYLRVAMGHENEPLDEFVEAHRTCLSGLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRKRLDDGKEKAVRLEKKVMVLTQGYEMRAKKSLWPQIEATFKQMDTAATELECFQVLQKQEQLAASHRINNIWAEVKNQKELEKTLQKRYGDLLAEVERIQNIMNQYRAHSNQEEEAAAEKRSLESAETSDETRMRDIGNHESISHSDEHGSSKSVNSTHDETSVQLQAEATPGLKNDMDADSDLEQIHDADVKLQDVTRVAEEGVSATLVPDKSIDSCIADRETTLDTGAPEDTRIERGGGDQDLKNPDNAAIGSHDGKIPETPDLD 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2302 965 Coils Coil 167 187 - -
Lele14g2302 965 SMART sant 58 105 IPR001005 -
Lele14g2302 965 SMART sant 6 55 IPR001005 -
Lele14g2302 965 MobiDBLite consensus disorder prediction 398 412 - -
Lele14g2302 965 Pfam Myb-like DNA-binding domain 10 70 - -
Lele14g2302 965 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 801 - -
Lele14g2302 965 FunFam CDC5 cell division cycle 5-like 60 120 - -
Lele14g2302 965 MobiDBLite consensus disorder prediction 212 236 - -
Lele14g2302 965 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Lele14g2302 965 MobiDBLite consensus disorder prediction 221 236 - -
Lele14g2302 965 CDD SANT 10 53 IPR001005 -
Lele14g2302 965 FunFam CDC5 cell division cycle 5-like 5 59 - -
Lele14g2302 965 Gene3D - 60 114 - -
Lele14g2302 965 Pfam pre-mRNA splicing factor component 405 652 IPR021786 -
Lele14g2302 965 MobiDBLite consensus disorder prediction 378 445 - -
Lele14g2302 965 MobiDBLite consensus disorder prediction 113 150 - -
Lele14g2302 965 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Lele14g2302 965 MobiDBLite consensus disorder prediction 806 861 - -
Lele14g2302 965 MobiDBLite consensus disorder prediction 915 942 - -
Lele14g2302 965 MobiDBLite consensus disorder prediction 810 853 - -
Lele14g2302 965 CDD SANT_CDC5_II 55 106 - -
Lele14g2302 965 Gene3D - 5 59 - -
Lele14g2302 965 MobiDBLite consensus disorder prediction 915 965 - -
Lele14g2302 965 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Lele14g2302 965 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Lele14g2302 965 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Lele14g2302 965 Coils Coil 797 827 - -
Lele14g2302 965 Coils Coil 680 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2302 Lele-ChrLele14 27725658 27730052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2302 1 827 MYB-Related Transcription Factor Family AT1G09770 76.386 0.0 1237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g2302 Myb_Cef 1.5e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2302 14 27725658 27730052 Lele15g0048 15 292189 296725 hybridization
Lele14g2302 14 27725658 27730052 Lele16g0049 16 325399 329787 hybridization