Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2298 ATGCATTCTACAACATTCATTCCTCATTTCCAGGAAAGCGATGAAATTTCCTGGGGACCAGATCCACTTCAGGATATTCTTGATTTTCCTGGAATTGTTTCTGTCCAGAACGATCAGTTGGAAAATAGTTCTTGTTGCATGCCTAATGACAATACTAAAAAAACTGATCTAGCGGAATGGGTTGATCATTTAATATCGGTTGATGATTCTCTACAACCAAATTGGAGTCAGCTTCTTCGTGGGGATGATGTAACAGATTCAAAATCAAAGGAGTGCCAGGTTCCCTGGCAGCAGCATGTACCATCTGAAGAAATTAATGCCCTTAATAATTCGGTGTCAACGGCGCCACAAATTAAGCCAAGAATGCGTTGGACTCCAGAACTTCATGAGTCCTTCGCGGAAGCAGTTAATCAGCTTGGTGGCAGTGAGAAGGCTACTCCTAAGGGTGTCTTGAACCTGATGAAAGTCGAGGGCCTTACCATCAATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCCGAAGGAACTTCCGAGAAAAAATTGACATCAATTGAAGAAATGAAATCCCTAGACCTGAAAACGAGTATGGGGATCACTGAAACTCTGCGGTTGCAAATGGAATTACAAAAACGACTTCATGAACAACTTGAGATTCAAAGAAACCTGCAGATTCAGATTGAGGACCAAGGCAAGCTTCTTCATATCATGTTTGAGAGACAAAAAGAAATGGATAATGGCAAGCTCAAGGGCTCCTCCTCCATGGATGAGCCTTCTGCTCCCTTATCAAACAAGGTTGAAAATTCAGAAATGTCAAATGAGGAACATGACAAATCGGGAACTTCCCGGGGTGGAAGCACAAAGCTAAAAGCAGATGACAATATGGTTGAACAGGAGCTGGGAGAAGATCGGTTTGAGGGACCACCCACAAAACGTGTAAAGAGTTGA 969 0.4262 MHSTTFIPHFQESDEISWGPDPLQDILDFPGIVSVQNDQLENSSCCMPNDNTKKTDLAEWVDHLISVDDSLQPNWSQLLRGDDVTDSKSKECQVPWQQHVPSEEINALNNSVSTAPQIKPRMRWTPELHESFAEAVNQLGGSEKATPKGVLNLMKVEGLTINHVKSHLQKYRTARYKPESSEGTSEKKLTSIEEMKSLDLKTSMGITETLRLQMELQKRLHEQLEIQRNLQIQIEDQGKLLHIMFERQKEMDNGKLKGSSSMDEPSAPLSNKVENSEMSNEEHDKSGTSRGGSTKLKADDNMVEQELGEDRFEGPPTKRVKS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2298 322 MobiDBLite consensus disorder prediction 253 322 - -
Lele14g2298 322 MobiDBLite consensus disorder prediction 276 290 - -
Lele14g2298 322 Pfam Myb-like DNA-binding domain 121 172 IPR001005 -
Lele14g2298 322 Pfam MYB-CC type transfactor, LHEQLE motif 204 250 IPR025756 -
Lele14g2298 322 Gene3D - 118 177 - -
Lele14g2298 322 FunFam Myb family transcription factor 118 176 - -
Lele14g2298 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 110 282 IPR044848 GO:0003700
Lele14g2298 322 MobiDBLite consensus disorder prediction 297 322 - -
Lele14g2298 322 SUPERFAMILY Homeodomain-like 118 173 IPR009057 -
Lele14g2298 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 176 IPR017930 -
Lele14g2298 322 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 173 IPR006447 GO:0003677
Lele14g2298 322 MobiDBLite consensus disorder prediction 259 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2298 Lele-ChrLele14 27711289 27713573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2298 2 289 G2-like Transcription Factor Family AT3G04450 47.937 8.66e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele14g2298 Myb_DNA-binding 1.9e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2298 14 27711289 27713573 Lele13g1917 13 26836517 26837320 CCT
Lele14g2298 14 27711289 27713573 Lele14g1852 14 25178068 25179743 CCT
Lele14g2298 14 27711289 27713573 Lele15g0490 15 2881857 2882666 CCT
Lele14g2298 14 27711289 27713573 Lele16g0513 16 2832267 2833913 CCT
Lele13g2370 13 29378333 29380617 Lele14g2298 14 27711289 27713573 ECH
Lele14g2298 14 27711289 27713573 Lele14g2298 14 27711289 27713573 ECH
Lele14g2298 14 27711289 27713573 Lele15g0050 15 302939 306946 hybridization
Lele14g2298 14 27711289 27713573 Lele16g0053 16 342015 345631 hybridization