Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2297 ATGTGGGAGGTGCGTGAATTTGGCAGCCCAGATGTGCGAAAGGGCGTGTGGCCAATCGGCGGCGGGGGCGCGGGTGCAGCTGGAGGGGTGCTACGTGCAGTACGAGATGGAGGAATGGGGAACAGGGGAAGTGCTTTACAGGGAATGTGGGGAAGCGAATGGGAATGGGGTGATGATGGAATTGGAGGGAGTGGTGGAGAAGAGAGTGATGAGCATGGACATTGAGGAGTAAATAATAGCAGCAGCAGCAGCGCCAAGAGAATAGCAGCCATAGCGGTTGGAGGGGGTGTGGCCGTCTGTTTGGCTTTAGTGTTCTTAAAATCAAATTCTGAGAAAGAATCTTCTGCAAGCCCTGGGGAAGAACCTGTTGATGAGTCCAGCTCTGCTCCTATTCAAAGAGAAAATCTAACAAATGGACATTATGGGAAAGAGATAATGAATCCAAAAACTATACACAATAAGCTACATCTTGGATCCAGTTCAACAAGTTGCACAGAACCGTCTGAGGCTTTGACTAGAGATTATCGTGTCTCTGATCTGTATCTGGACCTGAACGGTGTCATCAATGATTCTACACATAATAACAACCCCACAAGCAGCAAGACTAATATTGACATTGCCTCTTCAATATTGGGAGAAGTGAAGATTTCCTTAAACTGTGACCGCGCACTTGGACAACCAAACTTCAACATTCCAAACTTGAATGATGCTATGGAGTTCATGGAGAAGTACCTTGAGCATAACAATATTGCTGGACCCGAATTTTCTATGGTGAATTTATTAAACAATTTGTGTGAGAATTTCTTTAACAATGCAAACAGATTAACAAATGGCTCACAACAAGCTGTTACTCAAGATGAGAGGAAGCTATTTCAGTTTCTTAGTGACATAACAAAAGGTTCAGAAAATGTGAAGATATCATTGATCGATGAGTATGGTAATGGGGAATTGCCAAAGTTTAATTACATACCACATAATCTAATATATCAGAGTGCTAATGTGAATATTTCACTAGCACGTATTGCGGATGAATGTTGCTGCTCAAATTGTTTAGGAGACTGTCTTTCTCAAATATTACCTTGTGCATGTGCTCAAGAAACTGATGGAGAGTTTGCTTACACGTTGCATGGCTTGTTGAAAGACGAATTTCTAACGTCTTGCATGTCAATGAAAAAGGAACCTCAAGCTCATGAAATGGTGTACTGTCAAGAGTGCCCATTAGAGAGGTCTAAGAATGAATGCATGGCTGAGCAATGCAAGGGACACCTGATCAGGAAGTTCATTAAGGAATGTTGGAGGAAATGTGGATGTGACATGGAGTGTGGAAATCGTATAGTGTTCTTTACTGGAGAAGGAAAGGACTGGGGCCTGAGAACACTGGAAGATTTGCCTAGGGGGTCCTTTGTATGTGAATATGTTGGCGAAATATTAACCAACACGGAGCTGTATGAAAGAATTGTGAACAAAAATGGAAATGATAAGCATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAAGGGTGTTAAAGGACGAGGAGGCACTATGTCTTGATGCAACATATAATGGAAATGTTGCCAGATGCTCAGATGCAAATCTAATTGACATTCCCGTTGAAGTGGAGACTCCCGATCGCCATTATTATCATCTTGCCTTCTTTACTAACAGTAACGTGAGTGCTTATGAGGAGTTGACGTGGGTAGGTGGGCCTGAGCCTCAATCAATATATGGCATTATATTTGCATCTTTTTCCTGCAAGCATTACTTGTGCAAGGATTATGGTATTGACTTTGATGATCATGATCACCCAGTCAAAGCATTCAAATGTTGTTGTGGGAGCTCGTTCTGTCGGGATAAGAAGCGGAAAGGTGTAGATGATAACATCATTGTCGAGGTCGAAGAAGGCCGCATGCTGCTGAAGCTCAGACATGTTATTATGGCTGTGGCCCCAGACGGTGTCTGTCTTCTGAGCCCGAAACGTGTGCATTCTGTCTTTTGGTTGCATTCCGATCTTTTTAGATTCATTTGCTGGTTATTCTCAATTATAGTTGTGTAG 2061 0.4294 MWEVREFGSPDVRKGVWPIGGGGAGAAGGVLRAVRDGGMGNRGSALQGMWGSEWEWGDDGIGGSGGEESDEHGHXGVNNSSSSSAKRIAAIAVGGGVAVCLALVFLKSNSEKESSASPGEEPVDESSSAPIQRENLTNGHYGKEIMNPKTIHNKLHLGSSSTSCTEPSEALTRDYRVSDLYLDLNGVINDSTHNNNPTSSKTNIDIASSILGEVKISLNCDRALGQPNFNIPNLNDAMEFMEKYLEHNNIAGPEFSMVNLLNNLCENFFNNANRLTNGSQQAVTQDERKLFQFLSDITKGSENVKISLIDEYGNGELPKFNYIPHNLIYQSANVNISLARIADECCCSNCLGDCLSQILPCACAQETDGEFAYTLHGLLKDEFLTSCMSMKKEPQAHEMVYCQECPLERSKNECMAEQCKGHLIRKFIKECWRKCGCDMECGNRIVFFTGEGKDWGLRTLEDLPRGSFVCEYVGEILTNTELYERIVNKNGNDKHTYPVTLDADWGSERVLKDEEALCLDATYNGNVARCSDANLIDIPVEVETPDRHYYHLAFFTNSNVSAYEELTWVGGPEPQSIYGIIFASFSCKHYLCKDYGIDFDDHDHPVKAFKCCCGSSFCRDKKRKGVDDNIIVEVEEGRMLLKLRHVIMAVAPDGVCLLSPKRVHSVFWLHSDLFRFICWLFSIIVV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2297 686 MobiDBLite consensus disorder prediction 112 135 - -
Lele14g2297 686 Pfam Pre-SET motif 297 444 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele14g2297 686 ProSiteProfiles SET domain profile. 443 571 IPR001214 GO:0005515
Lele14g2297 686 SMART set_7 443 585 IPR001214 GO:0005515
Lele14g2297 686 Pfam SET domain 455 568 IPR001214 GO:0005515
Lele14g2297 686 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 140 625 - -
Lele14g2297 686 SUPERFAMILY SET domain 304 619 IPR046341 -
Lele14g2297 686 SMART preset_2 294 436 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele14g2297 686 Gene3D SET domain 271 573 IPR046341 -
Lele14g2297 686 MobiDBLite consensus disorder prediction 52 81 - -
Lele14g2297 686 MobiDBLite consensus disorder prediction 153 169 - -
Lele14g2297 686 MobiDBLite consensus disorder prediction 112 169 - -
Lele14g2297 686 CDD SET_SETDB-like 318 568 - -
Lele14g2297 686 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 134 663 IPR025776 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2297 Lele-ChrLele14 27700061 27710881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2297 428 574 C2H2 Transcription Factor Family AT2G23740 34.568 8.19e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele14g2297 Pre-SET 2.9e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2362 13 29337815 29340987 Lele14g2297 14 27700061 27710881 CCT
Lele14g2293 14 27671211 27673602 Lele14g2297 14 27700061 27710881 CCT
Lele15g0057 15 343452 345849 Lele14g2297 14 27700061 27710881 CCT
Lele16g0059 16 375731 378113 Lele14g2297 14 27700061 27710881 CCT
Lele14g2297 14 27700061 27710881 Lele05g1349 05 8470778 8475811 CCT
Lele14g2297 14 27700061 27710881 Lele06g1211 06 7609311 7617306 CCT
Lele14g2297 14 27700061 27710881 Lele07g1407 07 8545899 8550525 CCT
Lele14g2297 14 27700061 27710881 Lele08g1205 08 7602111 7606901 CCT
Lele14g2297 14 27700061 27710881 Lele14g2297 14 27700061 27710881 ECH
Lele14g2297 14 27700061 27710881 Lele15g0052 15 314036 318275 hybridization
Lele14g2297 14 27700061 27710881 Lele16g0054 16 349118 355066 hybridization