Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2276 ATGGAGCAGTATGAAGTACTGGAGCAAATTGGAAAAGGTGCTTTTGGCTCCGCTCTTCTTGTGCGGCATAAGCATGAGAGAAAAAAATACGTACTGAAGAAAATTCGCCTTGCTCGCCAAACTGAGCGGTCTCGTCGATCTGCACATCAGGAGATGGAGCTAATCTCTAAATTAAGAAATCCATTTATTGTTGAGTATAAAGATTCCTGGGTAGAAAAGGTGACATTTTCTTATTTGCACTTCAAATCTAAGTGTCATTTATCTGCAGAAACTTTGGTTGAATTTTACTTACGAGCAGTTGATGGTGGAGCAGGTGATTTTGGACTTGCCAAAATATTGACTTCAGATGATCTTGCTTCCTCTGTTGTCGGAACTCCTAGTTACATGTGCCCTGAGCTCTTGGCTGATATTCCTTATGGTTCTAAATCGGATATTTGGTCCTTGGGATGCTGTATATATGAAATGGCAGCTCATAAGCCTGCATTTAAAGCATTTGATATACAGGCACTAATCAACAAGATTAACAAGTCTATAGTGGCTCCACTGCCAACAAAGTATTCTGGTGCATTTCGGAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCTGAGCTTAGACCTAGTGCCGTACATAAATTTGACATTTTAATCACACTGACTGTGATATATAATTTCCATTGTACCCTGTCACCCCTGCATGACACTTGTGATGCTTATCACGCTTGTGCAGCTGCAGAGCTGCTTGGACACCGGCATCTTCAACCTTATGTTCACAAGATCCATCTAAAGCTTAATAGCCCCAGGCGAAGTGCATTACCAGTTCGTTGGTCAGAATCCAACTACATGAAGAAAACTAGATTTCTGGAGCCAGAAGATGATCCTGTTTCAATATACAGAGATAAGCGACATTCTTTTAGCAATGATCTGACTTTTAAATCTAGCATATCTGGAGCTGAGCCAGATTCTGTTTGTTCTACCGTAGAAATAGATTGTGCTCCGGATCATTTGAATGAACGGTTGGCAGAGCTATATATTGGACATAGCCTCGAGCTTCCTACTCCACGCAAAGCCAGACAATCAGTTTGTACAACTCGCAGAGCATCATTTCTATTGCATAAAAGAGGTTCTGATCAACACTCTCGTCATGGGCCTGGTATTGGTTTACTTAGCCATATAAAGTCTCCAGACATTTCAGTAAACTCTCCTAGAATTGATAAGATAGCTGAATTCCCACTAGCGTCATATGAGGAACCACTTTTTCCCATCTATAGAACTCCAACCGCAGCCAAGGGTTCCTCAGGCTCCACACCCTGTGGTGATCGTTCAATCATGAAAGATAAATGCACAGTTCAGATATGTGATAGAGCCTCTGTCAAGCATCGATTGACAGATTCATGGCAGGGAATCAAGCTAAACACGTTTCGGGAAAATGCTGAGGATAAAAGTGGCTCCTCTGATCAAAATGCAACTGCTGGAGCATCAAGCCGTGCCTCTTCAGACACGTGCCGCCAGCAGTTTGACACTTCATCATTCCAACAAAGGGCTGAAGCATTGGAAGGGTTGCTTGAATTTAGTGCAAGATTGCTACAGCATGAAAGGTATGAAGAACTAGGGGTTTTATTGAAACCATTTGGACCGGGGAAGGTTATCATTAACAGGTTTCTTCATTCAGTTCTTTTGCTGAATCTTGTTAATTCAAGTTTGCAATCTGACAAACGAACAATTCCTGTCCGACAATTGTTTATGTGGTCATATTCGGTCATTTCTCTTTTCTTAAACCTTGTCTTGACCAGAAAAGGAAGAAAAGGTTAA 1809 0.4157 MEQYEVLEQIGKGAFGSALLVRHKHERKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKVTFSYLHFKSKCHLSAETLVEFYLRAVDGGAGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRSLVKSMLRKNPELRPSAVHKFDILITLTVIYNFHCTLSPLHDTCDAYHACAAAELLGHRHLQPYVHKIHLKLNSPRRSALPVRWSESNYMKKTRFLEPEDDPVSIYRDKRHSFSNDLTFKSSISGAEPDSVCSTVEIDCAPDHLNERLAELYIGHSLELPTPRKARQSVCTTRRASFLLHKRGSDQHSRHGPGIGLLSHIKSPDISVNSPRIDKIAEFPLASYEEPLFPIYRTPTAAKGSSGSTPCGDRSIMKDKCTVQICDRASVKHRLTDSWQGIKLNTFRENAEDKSGSSDQNATAGASSRASSDTCRQQFDTSSFQQRAEALEGLLEFSARLLQHERYEELGVLLKPFGPGKVIINRFLHSVLLLNLVNSSLQSDKRTIPVRQLFMWSYSVISLFLNLVLTRKGRKG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2276 602 MobiDBLite consensus disorder prediction 476 500 - -
Lele14g2276 602 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 105 522 - -
Lele14g2276 602 ProSiteProfiles Protein kinase domain profile. 4 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2276 602 SUPERFAMILY Protein kinase-like (PK-like) 1 213 IPR011009 -
Lele14g2276 602 Pfam Protein kinase domain 105 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2276 602 Pfam Protein kinase domain 4 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2276 602 MobiDBLite consensus disorder prediction 482 500 - -
Lele14g2276 602 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Lele14g2276 602 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele14g2276 602 Gene3D Transferase(Phosphotransferase) domain 1 103 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2276 Lele-ChrLele14 27593829 27598439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2276 10 208 MAP Kinase Kinase Kinase AT1G53570 27.686 1.96e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele14g2276 Pkinase 1.3e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2334 13 29189336 29192718 Lele14g2276 14 27593829 27598439 CCT
Lele14g2264 14 27534499 27538026 Lele14g2276 14 27593829 27598439 CCT
Lele15g0081 15 480132 484167 Lele14g2276 14 27593829 27598439 CCT
Lele16g0088 16 521993 525559 Lele14g2276 14 27593829 27598439 CCT
Lele14g2276 14 27593829 27598439 Lele14g2276 14 27593829 27598439 ECH
Lele14g2276 14 27593829 27598439 Lele15g0071 15 427009 432172 hybridization
Lele14g2276 14 27593829 27598439 Lele16g0076 16 457972 465597 hybridization