Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2275 ATGTTCGATGGAGTGCCAGAGCAGTTCCACCAATTCATAGCTCCAACAAACTCACTTCCTCTTCAACTCTCCTTCCCTACTTTCGATGCTTATAACCCTTCTCCCCATCACTTGCCCCTCCCACCACCAGCACCGCAGCCGCCACCACTGCCGCCAAATCTCTTCTCCCCATTGCACCTCAAAGATGAACGACACGAGCAGCCAGAAACTAGCATGAACTTACAGATTAATGAAAAAGAACCACAAATTGGCGAGCATGAGCTGAGTGATTGCTCCTGGACCGACGATGAAGTGCTTGCTCTTTTGAGGATCAGATCTACCCTCGACGCTTGGTTCCCTGAACTCACTTGGGAACATGTTTCCAGGAAGCTTGCAGAGCTTGGATTTAAAAGGAGTGCAGACAAGTGCAAGGAGAAGTTCGAAGAAGAAACCAGTTACTTCAACAACATCCATTACACCAAGAACAGCGGTTACCGCTTTGTTAGTGAGCTCGAACAACTTTACCAACAGCAAGAAGCATATCAAATACCTGGGGTCGAGGTTGAGGTTGGATCTCAAGAGAGTAAGCAGCTGCCGGAAAAGCCGACCGAGGAAAAACACGGGAAGATGGATCACGCATTAGCAGACGGCTCAGCAAATGACGCATCATTGACCAAACAATGTGAGGAAACTGTGAAAATGGTGGGGGCATCAAAGCGCAGGAAGAGCAAGAGGCACGATAAATTTGAGATTTTGAAGGGTTTTTGTGAGAACGTCGTGAACAAAATGATGGCAAAGCAAGAACACATGCACAATAAGCTGCTGGACGACATGTTTAAAAGAGACCAAGAGATATTCGCGAGAGGGGAAGCTTTGAAGAAACAGGAGATAGATAGGATGAACAGGGAGCTCGAAATTATGGCTAAAGAGCAGGCTGTTGCCGGCCAAAGGCAAGCCGCCATTATTGATTTGTTGAAGAAAATTTCGGACCAGAGCCATTTTAACAAAACAGTATCAGACGATCCCAATCCAAATTCTCTGACTGCTTCTTCCCCGTCGAACTCACAAAACCCTAATCCATACTGTAATTATACCGGGGAGAACAATCCGGAGCCGTCGCCACGAGTGGTTCTTAATTGTACAAGCGAAGGTGCGTCAGATCAAAACCCTTATGGCTCAAGCCAAGTTCCCAATCCTTCTTCAATTGATTTTGGTCCAGCACTTACCCAGAACCCTAATTCCGTCATTGCCCAGACAAATGGACTGCCCGAAAAAACAGCTTCGAATAATTCTGCATGGAGAGAGAAAGAAGAGGTGGGAAGAAGGTGGCCAAGGGAGGAAGTGGTGGCGCTGATAAACCTGAGATGCAGTGCGAATGAAGAGAGAGAAGGAGGGAGCAGCAGGGTTCCTCTGTGGGAGAGAATATCGGAAGGGATGAGGGAAATGGGGTACAAGAGAAGCGCCAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAGAAAGACGAAGCATCTGAGCAAGAAAAGGTCGGTGGATTCTAGAACCTGTCCCTACTTCCATCAGCTCACTTCTTTGTATTCTCAAGGAATGCTTCATCAGCTTCAAGATAATCGCCCCTCCCACTCTTCTCAGACTTAG 1626 0.4705 MFDGVPEQFHQFIAPTNSLPLQLSFPTFDAYNPSPHHLPLPPPAPQPPPLPPNLFSPLHLKDERHEQPETSMNLQINEKEPQIGEHELSDCSWTDDEVLALLRIRSTLDAWFPELTWEHVSRKLAELGFKRSADKCKEKFEEETSYFNNIHYTKNSGYRFVSELEQLYQQQEAYQIPGVEVEVGSQESKQLPEKPTEEKHGKMDHALADGSANDASLTKQCEETVKMVGASKRRKSKRHDKFEILKGFCENVVNKMMAKQEHMHNKLLDDMFKRDQEIFARGEALKKQEIDRMNRELEIMAKEQAVAGQRQAAIIDLLKKISDQSHFNKTVSDDPNPNSLTASSPSNSQNPNPYCNYTGENNPEPSPRVVLNCTSEGASDQNPYGSSQVPNPSSIDFGPALTQNPNSVIAQTNGLPEKTASNNSAWREKEEVGRRWPREEVVALINLRCSANEEREGGSSRVPLWERISEGMREMGYKRSAKRCKEKWENINKYFRKTKHLSKKRSVDSRTCPYFHQLTSLYSQGMLHQLQDNRPSHSSQT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2275 541 MobiDBLite consensus disorder prediction 34 54 - -
Lele14g2275 541 Coils Coil 283 303 - -
Lele14g2275 541 CDD GT1 434 499 - -
Lele14g2275 541 ProSiteProfiles Myb-like domain profile. 85 144 IPR001005 -
Lele14g2275 541 Pfam Myb/SANT-like DNA-binding domain 92 166 IPR044822 -
Lele14g2275 541 Pfam Myb/SANT-like DNA-binding domain 434 520 IPR044822 -
Lele14g2275 541 PANTHER FI21293P1 49 536 - -
Lele14g2275 541 MobiDBLite consensus disorder prediction 326 393 - -
Lele14g2275 541 FunFam Trihelix transcription factor GT-2 93 149 - -
Lele14g2275 541 CDD GT1 93 150 - -
Lele14g2275 541 MobiDBLite consensus disorder prediction 328 393 - -
Lele14g2275 541 Gene3D - 436 497 - -
Lele14g2275 541 Gene3D - 93 149 - -
Lele14g2275 541 MobiDBLite consensus disorder prediction 35 54 - -
Lele14g2275 541 ProSiteProfiles Myb-like domain profile. 435 492 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2275 Lele-ChrLele14 27586392 27588489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2275 1 524 Trihelix Transcription Factor Family AT5G28300 35.413 3.50e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele14g2275 Myb_DNA-bind_4 1.3e-18 CL0123