Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2262 ATGATAATTTATACAGGGTTTTCATGTTACGTATCATACATAGCAGACTGCATATGCATTTTTTCTGTTGGAATCTTGAAACGCATGTGCTGGCATGCTGCAGCTTATAAGATCAATGGTGTCGCTGCAGAGGACAGAGACCACAAGTTCCTAACGAAAGCAATCGAAGAAGCATATAAAGGGGCTGAATGTGGCGATGGCCGCCCTTTTGGCTCAGTGATCGTTCGTGACGATGAAGTAGTCGTAAGCTGTCATAACATGGTCTTAAGAAACACCGACCCCACTGCCCACGCTGAGGTCACTGCAATACGAGAGGCATGTAAAAAGCTAAATCAAATTGATTTATCTGGCTGTGAAATGTACGCGTCTTGTGAGCCTTGTCCCATGTGTTTCGGAGCAATTCAGCGTTCAAGAATAAAGAGACTGGTTTACGGAGCCAGGGTAGATGCTGCCGCAGGATCTGGGGGTTTCATTTCAGATGCACTAAGGGGCACCGGATTTTATGAGAAGGCCCATTTGGAGATTAAAATGGCAGATGGATCTCTTGCTGTAATCGCACAAGAGGTATTTGAGAAGACCGGTTTCACGTTTCATCCTGTCAAATAG 606 0.4521 MIIYTGFSCYVSYIADCICIFSVGILKRMCWHAAAYKINGVAAEDRDHKFLTKAIEEAYKGAECGDGRPFGSVIVRDDEVVVSCHNMVLRNTDPTAHAEVTAIREACKKLNQIDLSGCEMYASCEPCPMCFGAIQRSRIKRLVYGARVDAAAGSGGFISDALRGTGFYEKAHLEIKMADGSLAVIAQEVFEKTGFTFHPVK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2262 201 Gene3D Cytidine Deaminase, domain 2 40 191 - -
Lele14g2262 201 SUPERFAMILY Cytidine deaminase-like 45 162 IPR016193 GO:0003824
Lele14g2262 201 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 43 155 - -
Lele14g2262 201 CDD nucleoside_deaminase 51 155 - -
Lele14g2262 201 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 47 145 IPR002125 -
Lele14g2262 201 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 97 134 IPR016192 GO:0008270|GO:0016787
Lele14g2262 201 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 45 160 IPR002125 -
Lele14g2262 201 FunFam tRNA-specific adenosine deaminase 45 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2262 Lele-ChrLele14 27528923 27531908 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2262 14 27528923 27531908 Lele15g0084 15 496213 498678 hybridization
Lele14g2262 14 27528923 27531908 Lele16g0091 16 534007 534930 hybridization