Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2260 ATGGCTTCTTGTGCCGCCCCAAGACCAGCTTTCTCCTTTCACCTTTCCTCGTCTTTTCGTCAACTTCACCCTCCCAAATCCAAGCTTCACCTGTCTCCTTCCAAATCCCTTCTGAATCCTCTGTCCCATAAACGCTCTCATCCTCGAAATTCCATCTCATGTTCCATTGACGTGTCCAAAGAAGATACTCCTACTTCAGGCTCAGAGCAGCCCGATTCACCTTCCTCGTCTTCCCCTTCACCGGACTCTGAGAATTTCGATAAGCGTCGCCTGGAAGAGAAATTCGCGGTGTTGAATACTGGAATTTATGAATGCAGATCCTGTGGGTACAAATACGACGAGGCCGTGGGTGATTCCTCCTATCCGATTCCGCCCGGATTTCAGTTCGAGAAGCTTCCTGATGATTGGCGATGTCCCACTTGCGGGGCTGCCAAGAGTTTCTTCCAGAGTAAAAGCGTTGAGATTGCCGGTTTTGCTCAGAATCAGCAGTTTGGTCTTGGTGGCAATTCTCTCACTTCTGGACAGAAGGCTGTGCTCATATATGGCAGTTTGCTCTTCTTCTTTGTTCTGTTTCTGAGTGACTTAAATATTCAGCGTAATGCCGTGCCATCCTTATCACGAAAAAAGTGCTACTTCCTCTTTGGAGGAAAGCTAGTCGACTATTTTCTTTTTAACAGACGGAAAAACGGCGTATATAGGAGATTAGGAGTGATGCACAATGCCAGCCACGTTTTTCAGAGATCAAGTGAAGGAGCTATTGGAACTGATAGACTTGCGTTGAAAGATTTGATGGTAACTTCATTTCAGAGATCAATGCTTTTATTGTATCTATCAATCCTCAGCGGTTGTGGCTGCCTCTTTTATAAGAAATTTGCACTGCAGTTAGCGAACTATGGCCAATCGGACCAGTTGGAATATTTTTGGTCCGTCTCTGGTTTTGGTTTTGGTTTTGATCTTTGTGGATTTCTGGGCCATATCGCAACAATCCTGAGACTTCAGTCCAAGCAGAGAACAAATCCAACAGTAAACATTATTATGGCTGTACTTGTATCTACTTCCTCTCATCTCAATTTTACTGTGAGGAGGCGCCAACCAGAGCTCGTACCTCCAGCAAAGCCAACTCCTCATAAGTTTAAGCTTTTGTCTGACTTGGACGATCAAGACAGTTTACGTGCACATGTTCCACTGGTACATTTCTACCGCCACAAGGCTTCAATGGCGGGGAAGGACCCAGTCAAAGTCATAAGAGACGCATTAGCTCAAACACTGGTATTTTACTACCCATTTGCAGGTAGGCTCAGGGAAGGTGTTGGCCGCAAGCTTTTAGTGGAATGTAATGGAAAAGGCGTTCTTTTCATTGAAGCTGATGCAGATGTAACCCTAGCTCAGTTTGGTGACAACCTTAAACCTCCATTTCCATGTTTCGATGACCTCCTTTACAATGTTCCTGCTTCTGAAGGAATCCTTCATTGCCCCCTCTTACTTATCCAGTGTGGAGGCTTCGTGTTTGCTGTTCGCATGAATCACACCATGACCGACGGACCGGGTATTTTGCAGTTCATGAATGCTTTAGCTGAGATAGCTAACGGGGCAAGTGAGCCCTCCATTCTTCCTGTTTGGCATAGAGACATCCTAAGTGCAAGGAACCCGCCACGTGTCACTTGCATCCATCATGAGTTTGAGGACGTGGCTGCTGGTGCCACCATTCCATTAACAGACATAGTCCATCAATCCTTCTTCTTTGGGCCAACTGAGATATCTGGCATTCGTCGTCTAATTCCTCGTCACCTCAGGCAATCTACAGCGTTTGAGGTCCTCACAGCTTGTCTCTGGCGTTGCCGTACTAAGGCCTTGCGACTAGATCCAAATGACGATGTTCGAACGTTGGTCATTGTAAATACACGTTTTGGCCGAGGTAGGTTTAACCCTCCAATACCTAGTGGTTATTATGGCAATGCTTTTGTGTATCCAGCTGCAGTTGCCACTGCGGGCAAGCTTTGTGAGAGTCCATTAGAATACGCGCTGGAGTTAGTGAAAAAAGCTAAGGCTGAAGTGAACGAAGAGTATGTGCACTCCATGGCTGATCTTTTGGTGACTAGAGGGCGACCTTGTTTTACCTCGGTGAGATCGTGGATGATATCAGATCTATCGCGTGTTGGCTTCAGAGATGTTGATTTTGGTTGGGGCAAGGCTGTGTATGCTGGTCTGGCGAAGGCTGGGCTTGGCTCACTTCCTGGAGTGAGTTTCTCTGTTGCATCTACCAATAATAAAGAAGAGGCAAGAGTTGTGCTTATGTGCTTGCCACCCAAAGCTATGAACAGGTTCGCCAAAGAGTTGGATAACATGCTTGGCACTTACAAGAATAAAGATTCCAGCATTATCATGTCTCCCTTGTAG 2397 0.4622 MASCAAPRPAFSFHLSSSFRQLHPPKSKLHLSPSKSLLNPLSHKRSHPRNSISCSIDVSKEDTPTSGSEQPDSPSSSSPSPDSENFDKRRLEEKFAVLNTGIYECRSCGYKYDEAVGDSSYPIPPGFQFEKLPDDWRCPTCGAAKSFFQSKSVEIAGFAQNQQFGLGGNSLTSGQKAVLIYGSLLFFFVLFLSDLNIQRNAVPSLSRKKCYFLFGGKLVDYFLFNRRKNGVYRRLGVMHNASHVFQRSSEGAIGTDRLALKDLMVTSFQRSMLLLYLSILSGCGCLFYKKFALQLANYGQSDQLEYFWSVSGFGFGFDLCGFLGHIATILRLQSKQRTNPTVNIIMAVLVSTSSHLNFTVRRRQPELVPPAKPTPHKFKLLSDLDDQDSLRAHVPLVHFYRHKASMAGKDPVKVIRDALAQTLVFYYPFAGRLREGVGRKLLVECNGKGVLFIEADADVTLAQFGDNLKPPFPCFDDLLYNVPASEGILHCPLLLIQCGGFVFAVRMNHTMTDGPGILQFMNALAEIANGASEPSILPVWHRDILSARNPPRVTCIHHEFEDVAAGATIPLTDIVHQSFFFGPTEISGIRRLIPRHLRQSTAFEVLTACLWRCRTKALRLDPNDDVRTLVIVNTRFGRGRFNPPIPSGYYGNAFVYPAAVATAGKLCESPLEYALELVKKAKAEVNEEYVHSMADLLVTRGRPCFTSVRSWMISDLSRVGFRDVDFGWGKAVYAGLAKAGLGSLPGVSFSVASTNNKEEARVVLMCLPPKAMNRFAKELDNMLGTYKNKDSSIIMSPL 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2260 798 PRINTS Rubredoxin signature 132 148 IPR024935 GO:0005506
Lele14g2260 798 PRINTS Rubredoxin signature 102 118 IPR024935 GO:0005506
Lele14g2260 798 Gene3D - 565 779 IPR023213 -
Lele14g2260 798 Pfam Rubredoxin 103 148 IPR024935 GO:0005506
Lele14g2260 798 Pfam Transferase family 360 780 - -
Lele14g2260 798 MobiDBLite consensus disorder prediction 32 82 - -
Lele14g2260 798 Gene3D - 95 150 - -
Lele14g2260 798 ProSitePatterns Rubredoxin signature. 132 142 IPR018527 GO:0046872
Lele14g2260 798 CDD rubredoxin 103 149 IPR024935 GO:0005506
Lele14g2260 798 Gene3D - 354 562 IPR023213 -
Lele14g2260 798 SUPERFAMILY Rubredoxin-like 99 165 - -
Lele14g2260 798 MobiDBLite consensus disorder prediction 23 86 - -
Lele14g2260 798 FunFam Rubredoxin 98 154 - -
Lele14g2260 798 ProSiteProfiles Rubredoxin-like domain profile. 100 151 IPR024934 GO:0005506
Lele14g2260 798 PANTHER ACYL TRANSFERASE 4 358 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2260 Lele-ChrLele14 27519147 27526441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2260 360 779 Monolignol Biosynthesis Gene Families AT5G48930 30.684 1.29e-41 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2260 14 27519147 27526441 Lele15g0086 15 505525 507008 hybridization
Lele14g2260 14 27519147 27526441 Lele16g0093 16 545473 547666 hybridization