Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2251 ATGGCTTTTGATTTAAGTTCCGCGTTTCCGAAATTGCAATTGCTTATGACTTCTGATCACGCTTCCGTGGTGTCCATGAACCTATTTGTGGCACTCCTGTGTGCTTGTATTGTCATTGGCCATCTTCTCGAGGAGAATCGATGGGTGAATGAGTCCATCACCGCCCTTTTGATTGGTCTTTGCACTGGCGTTGTCATTTTGCTGATAAGGGGTGGTCAAAACTCGCATCTTCTTGTTTTCAGCGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAACGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTAAATTTCATCACTATTGTGCTGTTTGGTGCTGTTGGTACATTGATATCTTGTGCCATCATAACTTTTGGTGTTACACAAGTTTTTAGAAAGATGGGCATTGGACCACTTGAGATTGGGGATTATCTAGCAATTGGTGCAATATTTGCCGCAACAGATTCTGTGTGCACATTGCAGGTGTTAAATCAGGACGAGACACCTTTACTCTACAGCCTTGTGTTTGGAGAGGGTGTTGTGAATGATGCTACGTCTGTTGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAACAAACTAGACTCTGGAATTGCTTTAGAATTTCTTGGCAACTTTCTGTACCTGTTTATTGCAAGCACATTGCTCGGTGTTCTGACTGGTTTGCTTAGTGCTTATATCATTAAAAAGCTGTATATTGGCAGGCACTCCACAGATCGTGAAGTTGCTCTAATGATGCTGATGGCATACCTTTCCTACATGCTGGCTGAATTATCCTATCTGAGTGGTATCCTCACTGTATTCTTCTGTGGGATTGTAATGTCTCATTATACTTGGCATAACGTGACGGAGAGTTCCAGAGTCACTACGAAGCATGCCTTTGCAACTTTGTCTTTTGTTGCTGAGACCTTTATCTTCCTTTATGTTGGTATAGATGCCCTGGACATTGAAAAATGGAGGTTTGTTAGTGATAGCCCTGGAAAATCAATAGCAGTGAGTTCAGTGTTGTTGGGTCTAGTACTCGCTGGAAGAGCAGCTTTTGTTTTCCCCCTATCCTTCCTATCCAACTTGGCTAAAAAGTCGCCAAATGAGAAAATCAGCCTCCGGCAGCAAGTGATCATATGGTGGGCTGGTCTGATGAGAGGTTCTGTTTCAATGGCACTTGCGTATAATCAGTTCACCATGTCGGGCCATACTCAATTGCGATCCCATGCAATTATGATCACTAGCACAATCACAGTAGTGCTCTTCAGCACAGTGGTCTTTGGTTTAATGACTAAGCCACTCATAAGGTATTTGCTGCCACACACAAGCAGCGTGGTCACGACGGAATCATCTCCGAAATCTTTTACCGTGCCGCTTCTTGGGGCTTCCCAAGATTCCGAAGCTGATATCGATGGAAATTCGCTTATTCGTCCAAGTAGCATTCGTTTATTACTCACCACTCCTACACACACAGTTCATCGCTACTGGCGTAAGTTTGATAACGCATTCATGCGCCCAGTTTTTGGAGGCAGGGGTTTTGTTCCTGTGGAGCCTGGCTCACCTACTGAACGAAACGGTCATCAGTGA 1608 0.4372 MAFDLSSAFPKLQLLMTSDHASVVSMNLFVALLCACIVIGHLLEENRWVNESITALLIGLCTGVVILLIRGGQNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAVGTLISCAIITFGVTQVFRKMGIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNKLDSGIALEFLGNFLYLFIASTLLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELSYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAETFIFLYVGIDALDIEKWRFVSDSPGKSIAVSSVLLGLVLAGRAAFVFPLSFLSNLAKKSPNEKISLRQQVIIWWAGLMRGSVSMALAYNQFTMSGHTQLRSHAIMITSTITVVLFSTVVFGLMTKPLIRYLLPHTSSVVTTESSPKSFTVPLLGASQDSEADIDGNSLIRPSSIRLLLTTPTHTVHRYWRKFDNAFMRPVFGGRGFVPVEPGSPTERNGHQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2251 535 Gene3D - 146 197 - -
Lele14g2251 535 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele14g2251 535 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele14g2251 535 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele14g2251 535 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele14g2251 535 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele14g2251 535 PANTHER SODIUM/HYDROGEN EXCHANGER 17 515 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele14g2251 535 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2251 Lele-ChrLele14 27423399 27428485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2251 11 535 Antiporters AT3G05030 76.923 0.0 841
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2308 13 29015305 29020492 Lele14g2251 14 27423399 27428485 CCT
Lele15g0106 15 637658 642832 Lele14g2251 14 27423399 27428485 CCT
Lele16g0116 16 703374 706595 Lele14g2251 14 27423399 27428485 CCT
Lele14g2251 14 27423399 27428485 Lele14g2251 14 27423399 27428485 ECH
Lele14g2251 14 27423399 27428485 Lele15g0097 15 591748 595288 hybridization
Lele14g2251 14 27423399 27428485 Lele16g0104 16 635962 641474 hybridization