Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2240 ATGAAGAATCACGCCAAAGAAAATAATAGCAAGGGAAATGGGTTTGTCCCCTCTTCTTTTAAGTTTATATCTTCTTGCATTAAGACTGCCTCCTCCGGAGTCCTTTCTGCCGGCGCCTCCGTCGTTGCCTCCATCCATGCCGATGGGTATGACCGTAAAGACCAGGATAAACGTGTTATTTTGCTTGATTACGGATACAGTCATGTAGAGCAGGTTAGTACATGCATGCCGCTTTTAAGGGGCTTTGCTGGTGCTGGCTGCAAACTAACTAACGAAGTGCTTTGGGCTTGCTTTGACAGGCTAGAACTTGGCCCATCTTCTTTCAAACATGTCCTCTTACTCGGATACTCCAATGGCTTTCAAGTTCTTGATGTGGATGATGCCTCTAAGGTCCGTGAACTTGTCTCCAAACGGGATGATCCAGTTTCATTTTTACAGATGCAGCCTATCCCTACGAAGTCTGGGTGTAAAGGATTTAGTGCGTCACATCCATTACTCTTGATCGTTGCATGTGATAAATCAAAGATCCCAGGTACAATGCAAAATGGAAGAGATGGATATACTGAACCTCAAGCTGAAAACATTGTCAGCTCAGCTACTGCTGTTCGATTTTACTCACTTAGTTCCCATAACTATGTTCATGCCCTGAGATTTCGATCAACTGTATATATGGTTAGATGCAGTCCCCAAATAGTGGCTGTGGGTCTTGCTGCACAAGTAAGTGTCCTCACTTACCCTGTACCTCAGTTGGGAGTCCAAGGAATGTTTGGGGTTAATATTGGCTATGGTCCGATGGCTATAGGGTCCCGTTGGTTAGCTTATGCTTCTATGAACCCATTGCCATCAAATGCAGGTCATCTAAGTCCTCAGAGTTTTACACCTCCAGCTGTCAGCCCATCAACATCACCTGGCAATGGAAACCTGCTACTTGATGCAGCCGGGGTGGTTGTTATCAAGGACTCTGTTTCTAGAGCTGTTGGGGCACAATTTAGAGCCCATACTAGTCCCATCTCTGCTTTGTCTTTTGACCCTAGTGGGACACTTCTAGTTACTGCATCGATTCACGGTAACAACATTAATATATTTCGAATTATGCCATCCTGCTCAAAGAATGGATCAGGTTCCCAAAGTAGCGATTGGAGTTGTTCTCGTGCACATATATACAAGCTACACTGTGGCATGACATCAGCAGTATGCTCCTATTCTCTATATTCCTCTAAGACACTTTTTTTTTATCTACTTAGGAAGGATTTCTACTTGTGTATACAGGTCATACAAGATATATGTTTTAGTCATTACAGTCATTGGGTTGCAATTATTTCATCCAAGGGTACTTGTCATATCTTCGTACTTGCCCCATTTGGTGGTGAGACGGTTCTTCAGATACAGAATCCAGACACGGAGAAACCGACACTTTTGCCAACTTTTTCTCTGCCGTGGTGGTTCACTCCTAATTTCACAGCAAACCAGCAACAGTTTTCCCTCACACCCCCATCTCCTGTCACTCTCTCTGTGGTTAGCAGAATAAAAAATAGTAATGCTGGATGGCTTAATACTGTTAGTAATGCTGCATCCTCTGCAGCAGGGAAAGTCTCAGTTCCATCTGGTGCTGTTTCAGCCGTCTTTCATAGTTCCATGCCTAATGATACACGGAATGCACACTCGAAGGTTCAGACCCTGGAATACTTGTTAGTTTATACTCCTTCTGGTCATTTGGTTCAGTATAAACTACTTCGTTCAATGGCAGCAGAGACAAGTGAAACTGCTCCAGGAACAGCCCCTGATACTTCAACACAGATGCAAGAAGAGGATTTGCGAGTGAAAGTTGAACACGTTCAATGGTGGGATGTCTGTAGGAGAAATGCTTGGCCAGAAACAGAAGAATATGTATCAGGAAAAAATCTTGGATACCGATCTGGCAGAAGTCTGAGGCCTATCTATGCGATTAGTCCTTTGGAGGTGAAGGAGCAGAATTTATGCGATGGTCATCAAACAAGCGGAGAGATTGAAATTGAGAATATTCCTGTTACAGAGGGTTGCTTTGGAGAGGCCCTTATTATAAATTATTCTGCCGTAGACATGACTCCACCCAGAGGTGTTATTATGGGTAGATTCTCAAGTTCTTCATCCGATTCACATGGGGTGGAAGAGAACTTTAATGAGACTGATTGCAAGAGCAGAGATGATGCTGCGTTGGCATCGCCTGTTTTAAGGCAGAAGCCTGGGGACAACGATGATGATGACATGTTTGGTTGGGTATTTGACTTCTCCGAAGAAGGTGCAGGGAGTTGGTGGTTAAAACATCAGAAGCCAACAATGGATGGTGTGGTTCATTTGAGGAAGCAGTTGGTTGATTACAGTGCCTCTCTGTTTCAGGAGGGTTTTCTGGATGATCAATTTACTCAGCTTCAGCAACTTCAAGATGAAAGCAACCCAGACTTTGTGGTTGAAGTGGTGACTCTGTTTTTTGAAGACGCAGAGAGGCTTCTTAACGACCTGGCAAAAGCACTAGGCCAGGAAAGCATTGGTTTCAAAAGAGTGGATGCCCATGTTCACCAGTTGAAGGGTAGTAGCTCCAGCATTGGAGCACAGAGAGTTCAGAAAGTCTGCATTGCCTTCCGCAGCTATTGTGAGGAGCAGAATGTTGAAGGGTGTCTTAAAAGCTTGCAACAAGTAAAAGAAGAGTATTGGCTGGTGAAGAACAAACTTGAGACTCTGTTCAAGATGGAGCAACAGCTTTTGGCCTCTGGGGGTTCGGTTCCCATGTAG 2769 0.4431 MKNHAKENNSKGNGFVPSSFKFISSCIKTASSGVLSAGASVVASIHADGYDRKDQDKRVILLDYGYSHVEQVSTCMPLLRGFAGAGCKLTNEVLWACFDRLELGPSSFKHVLLLGYSNGFQVLDVDDASKVRELVSKRDDPVSFLQMQPIPTKSGCKGFSASHPLLLIVACDKSKIPGTMQNGRDGYTEPQAENIVSSATAVRFYSLSSHNYVHALRFRSTVYMVRCSPQIVAVGLAAQVSVLTYPVPQLGVQGMFGVNIGYGPMAIGSRWLAYASMNPLPSNAGHLSPQSFTPPAVSPSTSPGNGNLLLDAAGVVVIKDSVSRAVGAQFRAHTSPISALSFDPSGTLLVTASIHGNNINIFRIMPSCSKNGSGSQSSDWSCSRAHIYKLHCGMTSAVCSYSLYSSKTLFFYLLRKDFYLCIQVIQDICFSHYSHWVAIISSKGTCHIFVLAPFGGETVLQIQNPDTEKPTLLPTFSLPWWFTPNFTANQQQFSLTPPSPVTLSVVSRIKNSNAGWLNTVSNAASSAAGKVSVPSGAVSAVFHSSMPNDTRNAHSKVQTLEYLLVYTPSGHLVQYKLLRSMAAETSETAPGTAPDTSTQMQEEDLRVKVEHVQWWDVCRRNAWPETEEYVSGKNLGYRSGRSLRPIYAISPLEVKEQNLCDGHQTSGEIEIENIPVTEGCFGEALIINYSAVDMTPPRGVIMGRFSSSSSDSHGVEENFNETDCKSRDDAALASPVLRQKPGDNDDDDMFGWVFDFSEEGAGSWWLKHQKPTMDGVVHLRKQLVDYSASLFQEGFLDDQFTQLQQLQDESNPDFVVEVVTLFFEDAERLLNDLAKALGQESIGFKRVDAHVHQLKGSSSSIGAQRVQKVCIAFRSYCEEQNVEGCLKSLQQVKEEYWLVKNKLETLFKMEQQLLASGGSVPM 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2240 922 Pfam Breast carcinoma amplified sequence 3 498 634 IPR022175 -
Lele14g2240 922 Pfam Hpt domain 817 895 IPR008207 GO:0000160
Lele14g2240 922 Gene3D - 187 464 IPR015943 GO:0005515
Lele14g2240 922 Gene3D HPT domain 771 922 IPR036641 GO:0000160
Lele14g2240 922 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 311 635 IPR045142 GO:0006914
Lele14g2240 922 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 777 912 IPR036641 GO:0000160
Lele14g2240 922 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 811 913 IPR008207 GO:0000160
Lele14g2240 922 SUPERFAMILY WD40 repeat-like 110 449 IPR036322 GO:0005515
Lele14g2240 922 SMART WD40_4 415 450 IPR001680 GO:0005515
Lele14g2240 922 SMART WD40_4 323 363 IPR001680 GO:0005515
Lele14g2240 922 FunFam Histidine-containing phosphotransfer protein 1 774 921 - -
Lele14g2240 922 CDD HPT 817 896 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2240 Lele-ChrLele14 27350822 27358848 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2240 14 27350822 27358848 Lele13g2318 13 29094133 29098011 CCT
Lele14g2240 14 27350822 27358848 Lele14g2253 14 27443859 27448047 CCT
Lele14g2240 14 27350822 27358848 Lele15g0093 15 570962 574823 CCT
Lele14g2240 14 27350822 27358848 Lele14g2240 14 27350822 27358848 ECH
Lele14g2240 14 27350822 27358848 Lele15g0105 15 634251 635320 hybridization
Lele14g2240 14 27350822 27358848 Lele16g0114 16 698369 699478 hybridization