Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2219 ATGTCCAAGTTCAAGCTCTCGGGTGCCAACGATGCTCAGGCAGAGCAGAGCAATCATCACCAGATGTCGCACTCGATATTGCCACAGCGTCCTCTATACTGCAGAGCAGAGCATCACCTGATGGATCATCAAGGGCATAACCAGAACCAATCTATGGATCATCATCAACTGACTTATGCTTCAAACCCATACCAGCCGACCCAGATAACTGCAACACCAGGATCCACCGTGACATCCGTTGGGACCATTCAATACAGTAGCCAGCCTGACGCCGGAGCTCAACTGGGACAACACCAACTTGCTTATCAGCACATTCACCAGCAACAGCAGCAGCAACTTCAGCAACAACTCCAAACCTTTTGGGCTAATCAGTACCAAGAAATCGAGAAGGCGACTGATTTCAAAAATCACAGCCTTCCCTTGGCCAGGATCAAGAAGATTATGAAAGCTGATGAGGATGTTCGAATGATATCAGCCGAGGCGCCAGTCATATTTGCAAGGGCGTGTGAGATGTTTATCCTAGAGCTAACTTTGCGTTCTTGGAACCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAACGATATTGCAGCAGCGATCACAAGGACTGATATATTTGATTTCTTGGTGGATATTGTGCCGCGTGAGGATTTGAAAGATGAAGTGCTTGCATCAATCCCAAGAGGGACAATGCCTGTGGCAGGGCCTGCTGATGCACTTCCTTATTGTTACATGCCACCTCAGCATGCACCGCAAGTAGGAGCGGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCGAACATGTATGCCCAACAGTCTCATCCCTACATGGCGCAACAGATGTGGCCTCAGCCTCCAGAGCAACGACAGTCAACTCCTGATCATAACTGGTGCAGTAGTGCGATGAGCTTAGAACATCAAATTGAGAGGGAAGTAGATAAAGCCCTCGGCACTCGCTTTGTCAATGGAACGTTATGTGCAATTTCAGGATTCTGCTTTCAATTTCGGTCTCACCGTATATGCGTGCCTGTACTACCAAAACGTCGCATACTATTAGCAATCACAATGCTCTGGCCAAAGCCTGAGTTTAACAGTGAGATCTTATATGTTTTACCTTATCAAGAGCGCAGAGATATAGATTACAATGCTATTACACTGAACCAGAGGACATATTCAATATGCCACGGTATTGGAAGTCTCATAAGTATCATCAGCCAAACTGTTGGATTCAAAGTTGGCTCAGAAGGGAAATTCAAGCCCTTATCCAGGAGAGAGCCAAATCGTCGCATTCTGGAACCTGAAAAGGAACAGGAGGAGTTGAAGATCGCGGTTTCAGAAGCGGCAATGCCCTTCTTAGCTTCAAGGACTGGCAGATTTGTGTACGAGGTGCAACTGTTTCTTGCTTCAGGATTGAATATTGAAGCTTATGACGCTGTTTACATACAACGATTGGGTTGGAGTTCGCCCGGCATAAACACAGAGACACAGGCGTCTCAGAGTGAACTTATTGATCAGAATACGCTAGGCGTAACTGAACAATTTACCAACGCTGCAACAGACATGGCGATAGTCTCAGACTACGGAGCTTTCATGGAGAAATTCATTCTCCGACCAACTTCTTCATCCCATGGTCTTCCGTTAAGTTCTCTTACTTTTGCAGTCAAAGAACTGGCGAGAACTCATCCGTTGGCTTCATCCACTGCTCCAGCTGTATCAGTACAACCGTCATGGACGAAATGGCTTGCAGGTTCCAAATTCCCACAGTTATCCCAATTGTCTACGCTTTCTAGTCATATAAATGGAGAGAATATACACTACGGCACACCCAGGAATCCCTATGAGGCAGATAGGGTGCCTGGGGGTTCTTCTAGCGGCTCTGCTGTTGCAGTTGGTGCAAAACTTGGAGATTTCTCCTTGGGAACTGACACCGGAGGAAGTGTAAGAGTGTCTTCTTCGTATTGTGGGATTTTTGGGATTCGTCCTTCTCATGGAGCTGTTTCAACATCAGGAGTTGTTCCCATGGCGCAGAGTTTTGACACTGTGGGATGGTTTGCTAGGTATCCTGTGATTTTGAGCAGAGTCGGACGTGTGCTTCTGAAGTTGCCTGAAGTAGCACCTATCAAACCCACTCGCATTATTATTGCGGACGATTGTTTGCAGCTTTCAAGCATTCCATACAATCTAGTTGCGCAAATTCTCATTAAAGCAGTTGAGAAGTTATATGGAGATGATGTATTGAAGCATGAAATCTTGGGCGACAACGTAAAGATCAGGGTTCCAAGTCTAAGGCATTTCATGATGGGTGTAGTTCTTCTGTTAATCCCTGGTCTCATCTACGTTGCGCCTTTCTTTTGCATTGTGGAATGCCTTAAATTGAAATCTGTTTTCTTGCTTTATACCGCATCACACGTAGGTCCAGGAATATCAGAACGAGTATCAGAAGCCCTAAGGACAACAGGGGAAAACATTGATCTCTGTCGGTCAGTAAAAGAGGAACTGCGTGATGCTCTTTCTGCTCTTCTTGGGGATTTTGGTGTGCTTGTTATTCCCACTGTTCTAGGGCCACCGCCAAAAGTAGGAACAAATGCGCGTGACCTGGAATTTTTTCGTGCAAATGCTTTTGCCCTGTTATCCATTGCTGGAGTATCGGGATTTTGCCAGGTTCGGTTTATTTTTTAA 2685 0.4596 MSKFKLSGANDAQAEQSNHHQMSHSILPQRPLYCRAEHHLMDHQGHNQNQSMDHHQLTYASNPYQPTQITATPGSTVTSVGTIQYSSQPDAGAQLGQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKATDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHAPQVGAAGVIMGKPVMDPNMYAQQSHPYMAQQMWPQPPEQRQSTPDHNWCSSAMSLEHQIEREVDKALGTRFVNGTLCAISGFCFQFRSHRICVPVLPKRRILLAITMLWPKPEFNSEILYVLPYQERRDIDYNAITLNQRTYSICHGIGSLISIISQTVGFKVGSEGKFKPLSRREPNRRILEPEKEQEELKIAVSEAAMPFLASRTGRFVYEVQLFLASGLNIEAYDAVYIQRLGWSSPGINTETQASQSELIDQNTLGVTEQFTNAATDMAIVSDYGAFMEKFILRPTSSSHGLPLSSLTFAVKELARTHPLASSTAPAVSVQPSWTKWLAGSKFPQLSQLSTLSSHINGENIHYGTPRNPYEADRVPGGSSSGSAVAVGAKLGDFSLGTDTGGSVRVSSSYCGIFGIRPSHGAVSTSGVVPMAQSFDTVGWFARYPVILSRVGRVLLKLPEVAPIKPTRIIIADDCLQLSSIPYNLVAQILIKAVEKLYGDDVLKHEILGDNVKIRVPSLRHFMMGVVLLLIPGLIYVAPFFCIVECLKLKSVFLLYTASHVGPGISERVSEALRTTGENIDLCRSVKEELRDALSALLGDFGVLVIPTVLGPPPKVGTNARDLEFFRANAFALLSIAGVSGFCQVRFIF 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2219 894 Gene3D Amidase signature (AS) domain 588 893 IPR036928 -
Lele14g2219 894 PANTHER AMIDASE 1 514 890 - -
Lele14g2219 894 Pfam Amidase 594 689 IPR023631 -
Lele14g2219 894 Pfam Core histone H2A/H2B/H3/H4 99 201 IPR007125 GO:0003677
Lele14g2219 894 SUPERFAMILY Amidase signature (AS) enzymes 594 890 IPR036928 -
Lele14g2219 894 SUPERFAMILY Histone-fold 106 210 IPR009072 GO:0046982
Lele14g2219 894 MobiDBLite consensus disorder prediction 1 25 - -
Lele14g2219 894 FunFam Nuclear transcription factor Y subunit gamma 103 216 - -
Lele14g2219 894 Gene3D Histone, subunit A 100 216 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2219 Lele-ChrLele14 27239408 27247961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2219 523 890 Acyl Lipid Metabolism Gene Families AT1G08980 51.654 1.43e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele14g2219 Amidase 9.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2219 14 27239408 27247961 Lele15g0127 15 762391 768038 hybridization