Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2214 ATGAGTGTTGATCTGGAATCGTTAGCGGAGGCGACCTCTGGCGCCATAGGATCGCTTTTGAGCACGACCATCTTGTATCCGCTTGACACCTGTAAGACCAAGTACCAAGCCGACGCTCGGGCTCATGGCCGCCAAAGATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCCGTCAGGTGCTTTCCCTTTATCAGGGTCTGGGGACAAAAAACCTTCAATCCTTCATTTCACAGTTCGTCTACTTCTATGGCTACAGCTACTTTAAAAGAATGTATCTGCAGAAGAGCGGTTCTAAACGTATTGGAACCAAAGCAAACTTCGTGATTGCTGCTGCTGCGGGGGCCTGCACTGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACGAGTGATTTTGGAAAATCTAAAGGTCTTTTGAAGACCCTTACAGAAGGCACTTGGGCAGATGCATTTGATGGTCTCAGCATTTCCTTACTGCTGACCTCAAACCCAGCAATTCAGTATACAGTTTTTGATCAGCTGAAACAACGGGCCCTGAAGAATCACCAAAACAGCGTAGACAGAGGATCATCTCCAGCATCACTTTCTGCATTTATGGCCTTTCTCTTGGGAGCTATTTCAAAGAGTGTCGCTACCGTCTTAACGTATCCAGCTATCAGGTGCAAGGTGATAATTCAAGCTGCAGACAATGAGGAAAAAGCAGCCTCAAAACCACAGAAAAAGTCAGGGAAAACAGTTTGTGGAGTCCTCTGTGCTATATGGCAAAGGGAGGGCTTACCGGGCTACTTCAAAGGATTGCATGCTCAAATCTTAAAGACTGTTTTGAGCTCAGCATTGCTTTTGACGATAAAGGAGAAGATCGCTGCCACTACCTGGGTACTTATACTTGCAATTAGAAGGTTACTGTTGCTCCCAAAGGGTAGAAAATCTGCAGGAACCGGAGGAGGAAGAAGGAAGTACAGGAGACACAAGATGATGTCAGGAATGTATACAATAATTGATGATCAACATGTTTCAGGATCTGTACCTGCTGCTTCAGATCCGGGACAGGTCACCGTGAAGTTCACAGACACCAATCTACAGACATTTCCTCCATCTGTACCGCCAGCGAAGATTTCTGGTGGTTCATGGCCTCCTCGTGATACTCACGCCTCTATGGGCGCATTTGTCACATATATAACACACAAGGTGAAGAAAAAGGAATGGAGCTATGACATAAATCTGGTGACTTGGGCAGCTGCCTTGTTCAGTTATTCTGTCTCTACGGATATTCCATTTTTGTCTTTATTCCGGCTCTGGCGAGTTCGTGCTCTTCGTATTTTCTCCATTCATAAAAGATGGGCGATTGCAGGTGTCATGTCTGCAAAATTTGTGGCACTTAAACCTCCGCGCACATATCTAATCTGCAGGAGAAAGGTGGTTCTTGATTGGTTTGGAATTCGCAGAAATATTCCTGCATGGATTGCATCTAATGCGTATCAAAAGCATCTTCGTCTTACGGGTCCTTCACCACCACCTCCCTATCATAAATTGGCCAGAGGTTGCTTGACAACATTATTTTGGTCCGCATTGAAGGATCGTTCACTACAAAACTTTGCTGAAAATCGCAGTACCTATTTTCCAGATCGGATTCCTCTTTTCAATCAATTTCGTTATAGATGTCAGTATAGGCTTAGCTCCATTAAAACGAACACGCTTCGATGCCCTGCAATACAGAAAGCAATATTGACTTCAGAACCTGACCCCATGAATGACAGAATTTCATAA 1788 0.4502 MSVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQADARAHGRQRYRNLSDVLWEAISSRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRMYLQKSGSKRIGTKANFVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWADAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNHQNSVDRGSSPASLSAFMAFLLGAISKSVATVLTYPAIRCKVIIQAADNEEKAASKPQKKSGKTVCGVLCAIWQREGLPGYFKGLHAQILKTVLSSALLLTIKEKIAATTWVLILAIRRLLLLPKGRKSAGTGGGRRKYRRHKMMSGMYTIIDDQHVSGSVPAASDPGQVTVKFTDTNLQTFPPSVPPAKISGGSWPPRDTHASMGAFVTYITHKVKKKEWSYDINLVTWAAALFSYSVSTDIPFLSLFRLWRVRALRIFSIHKRWAIAGVMSAKFVALKPPRTYLICRRKVVLDWFGIRRNIPAWIASNAYQKHLRLTGPSPPPPYHKLARGCLTTLFWSALKDRSLQNFAENRSTYFPDRIPLFNQFRYRCQYRLSSIKTNTLRCPAIQKAILTSEPDPMNDRIS 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2214 595 Pfam Mitochondrial carrier protein 105 188 IPR018108 -
Lele14g2214 595 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Lele14g2214 595 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Lele14g2214 595 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Lele14g2214 595 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Lele14g2214 595 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Lele14g2214 595 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Lele14g2214 595 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
Lele14g2214 595 SUPERFAMILY Mitochondrial carrier 7 293 IPR023395 -
Lele14g2214 595 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Lele14g2214 595 Gene3D Mitochondrial carrier domain 3 298 IPR023395 -
Lele14g2214 595 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Lele14g2214 595 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 314 IPR045900 GO:0005347|GO:0006635|GO:0015217
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2214 Lele-ChrLele14 27217885 27225146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2214 23 334 Chloroplast and Mitochondria Gene Families AT1G25380 26.687 1.68e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2267 13 28790602 28795113 Lele14g2214 14 27217885 27225146 CCT
Lele14g2203 14 27134674 27137374 Lele14g2214 14 27217885 27225146 CCT
Lele15g0145 15 870825 875340 Lele14g2214 14 27217885 27225146 CCT
Lele14g2214 14 27217885 27225146 Lele13g2288 13 28902884 28906662 CCT
Lele14g2214 14 27217885 27225146 Lele15g0125 15 755441 759169 CCT
Lele14g2214 14 27217885 27225146 Lele14g2214 14 27217885 27225146 ECH
Lele14g2214 14 27217885 27225146 Lele15g0133 15 791843 797432 hybridization
Lele14g2214 14 27217885 27225146 Lele16g0141 16 817117 826529 hybridization