Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2205 ATGGTCGTCATTTCATTGTCCATGGCTTACCGTCCTTTCTCTGTTCTGCTCATCCGTCGCATCTCTCTCTTTCCCTTGAACCCTAAACCCCCTCCAGCGATCAGCTCCTTCTACCTCTCTCGGCTTCTGACATCTAAACCCTACTCAACTTCTCAAAACCCTGTCACTGACCCCAAGTCTACTAGCCTTTCTGCCCGTCTGAGCTTCGTCTTTGATCAAATCGACACCATTGAGAAAGAACGCGACCAAAGGCACCAAACTCTTCAACGAATTCGAGCCTGGCGAGAGTCTAAGAAGACGCAGTTGCCGCCCAATGACACTAATGGACCAGAATCAGAAATAGGATCTGCAGCTAATGTTAACCCCAACCCAACCGATGCCGGTTCGGCTGAGCCGCATTTGGAGGCGACGAGGGAGGAAGAGAAGCGTGGTGAATTGGCGAAGAAGGACGTGGAGGTAGTGCACCCTTGGCCGGAATGGATCGAATTGATGGAGAGGTTGGTTCAGCAGAATTATTTTGATCACAGGAGGAGGGATGAGGATAAACTGGTTCAGGATTTGGGGTTCGATTGTGCCGGGGTGGCAGATGATGCGGGGTTTGATTTCACTAAGGACTTCAAGAGCGTGCAAACTGCCTGCCTCAATTTTGGGAAAGACCGTTTCGATATATTAAGGTCCTTGTCGAGGAAGGATATTCAAACTCTGGTTGGTTTTGGATGCCCGACTGCAGACAAAAAAGTGGTTTTCTCTGCGAAACTTCTAAGGAAGCATGTCCACCTCGATGAAGGAGATGTCTGTAGTTCCTGCAGTTTGAGAAACTCTTGTGAAAGGGCGTATCTGCTTACAAACAAAGAGGATGAGGCACGGACTATTGATGTCATGCGGGTCTTATCGACGTTTGGCTTTGATCCTGTGAATGGATCATCCATCGTTAAGTCACTTCTAAAGCAAAAGTCTGTGAAAACTGTAGTTCGTAAGTTGCTTCACGAGGTTGTTAAGTTGAGTTCAGTTCCCATAGATCCAAATCTACCCCCTCCTGTCATCAAAAAGCCTCCGCCTAAAGTGAAGCAACCTCCTCCACCTCCAAAGAAACGTGTTGGACGAGATGACGTTGAGATGAAAAAAGGAGACTGGCTTTGTCCAAAGTGTGATTTCATGAATTTTGCAAAGAATACTGTTTGCTTACAGTGCGATGCTAAACGCCCAAAAAGACAGTTGCTGCCAGGAGAATGGGAATGTCCTGAGTGCAACTTCTTGAATTACAGGAGGAACATGGTATGCTTTCATTGTGAGTGTAAACGCCCACCTGATGAATTTCTGGATAATAAAATTCAAGACAAACAGCATACTTCCAAACCAAGGGTGGATAAGATGTCCAGCAAGCGAGAGATTTCCAGTGCTTGGAATTTTGATTTTGATGACGCTGAATCAGATGGTGCAGATGTTGCAGCTTTTGAGTATGCAGATGCTCATGCAATAGATGAAGATTTTCCTTCAGATACTCAGGCTCAGCATGGGAATTTTGGACAGTGGGAAGGTGAATTTGAGAAAACTGATAGAGTGCCAGGATCCCGTGATGGACAATATTCTAATCCCAGTCTTAATAGGCCTGGATTAGGGTTTGATGATTTCGAGGATGAAGATGATGTAGATAGTTATGAGCTAGAGACACACAATAGTAGCGCTAGAGTGAAAGATTCTGAAGATGATTTTTCTGAATTTGAGGACTCTTCAGATGAAATGCGGTCCGTTCATTCTAATTTCAAGTCTGGTCGTTTTTCTGGTCCTGAACAGAAAGGCAAAGGCAGGGTTTCGACCAAGAAATTAAGCTTTTCTTCTGAGGATGATGATCTCACTTTTGATTCGGAAGAACAACGGTCCATTCATTCTAAATTTAAATCCAACCGTGTTTCTGGTGCTGCACGAAAAGGCAAAGGCAAAGGTCCAACCAATAAATTATTAAGCTTTGGTTCTGATTCTGATGAAGGCTTTATAGGTGGCCTCTACTCTGATGAGGATGAGGATTTAAATGAGGCACGTACTTCAAGACGAAATAATGGGAACAAGGCTTCAGGAAGGAGAGACTTCAACAGAGACAGGCGGCCTAAATCTAATGGTTCACACCTAGCAAACTTGTTCGGTGATGACTTTGATGGACCACCCCGGCAGTCTTATGGTAAAAGAAGAGAGTCTCAAGGAAATGGCCGTAATCGGCAGATGTCCGAAGGCAGGGAGCGAGGCCCACGACACTCGAACAAATCTCGCAGAGAACAATCTGGAAGACAAGGAGGACGGTTTAACAAATATGGTATGGATGAGAAAGATTTTGGTGAATTTAGAAATAGTAGACGTGTGATTGAACGGTAG 2367 0.4504 MVVISLSMAYRPFSVLLIRRISLFPLNPKPPPAISSFYLSRLLTSKPYSTSQNPVTDPKSTSLSARLSFVFDQIDTIEKERDQRHQTLQRIRAWRESKKTQLPPNDTNGPESEIGSAANVNPNPTDAGSAEPHLEATREEEKRGELAKKDVEVVHPWPEWIELMERLVQQNYFDHRRRDEDKLVQDLGFDCAGVADDAGFDFTKDFKSVQTACLNFGKDRFDILRSLSRKDIQTLVGFGCPTADKKVVFSAKLLRKHVHLDEGDVCSSCSLRNSCERAYLLTNKEDEARTIDVMRVLSTFGFDPVNGSSIVKSLLKQKSVKTVVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECKRPPDEFLDNKIQDKQHTSKPRVDKMSSKREISSAWNFDFDDAESDGADVAAFEYADAHAIDEDFPSDTQAQHGNFGQWEGEFEKTDRVPGSRDGQYSNPSLNRPGLGFDDFEDEDDVDSYELETHNSSARVKDSEDDFSEFEDSSDEMRSVHSNFKSGRFSGPEQKGKGRVSTKKLSFSSEDDDLTFDSEEQRSIHSKFKSNRVSGAARKGKGKGPTNKLLSFGSDSDEGFIGGLYSDEDEDLNEARTSRRNNGNKASGRRDFNRDRRPKSNGSHLANLFGDDFDGPPRQSYGKRRESQGNGRNRQMSEGRERGPRHSNKSRREQSGRQGGRFNKYGMDEKDFGEFRNSRRVIER 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2205 788 MobiDBLite consensus disorder prediction 673 705 - -
Lele14g2205 788 MobiDBLite consensus disorder prediction 554 570 - -
Lele14g2205 788 Gene3D - 366 404 - -
Lele14g2205 788 Gene3D - 405 436 - -
Lele14g2205 788 MobiDBLite consensus disorder prediction 517 788 - -
Lele14g2205 788 Pfam Zn-finger in Ran binding protein and others 374 402 IPR001876 -
Lele14g2205 788 Pfam Zn-finger in Ran binding protein and others 408 435 IPR001876 -
Lele14g2205 788 ProSiteProfiles Zinc finger RanBP2 type profile. 407 436 IPR001876 -
Lele14g2205 788 PANTHER ZINC FINGER PROTEIN 53 530 - -
Lele14g2205 788 MobiDBLite consensus disorder prediction 342 360 - -
Lele14g2205 788 MobiDBLite consensus disorder prediction 100 126 - -
Lele14g2205 788 FunFam Putative zinc finger, RanBP2-type 366 404 - -
Lele14g2205 788 MobiDBLite consensus disorder prediction 342 370 - -
Lele14g2205 788 ProSiteProfiles Zinc finger RanBP2 type profile. 374 403 IPR001876 -
Lele14g2205 788 MobiDBLite consensus disorder prediction 601 615 - -
Lele14g2205 788 MobiDBLite consensus disorder prediction 93 145 - -
Lele14g2205 788 SUPERFAMILY Ran binding protein zinc finger-like 367 403 IPR036443 -
Lele14g2205 788 ProSitePatterns Zinc finger RanBP2-type signature. 411 430 IPR001876 -
Lele14g2205 788 SMART zf_4 376 400 IPR001876 -
Lele14g2205 788 SMART zf_4 409 433 IPR001876 -
Lele14g2205 788 MobiDBLite consensus disorder prediction 721 788 - -
Lele14g2205 788 ProSitePatterns Zinc finger RanBP2-type signature. 378 397 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2205 Lele-ChrLele14 27151027 27155085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2205 13 690 EF-hand Containing Proteins AT1G55040 53.130 0.0 617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2205 14 27151027 27155085 Lele14g2205 14 27151027 27155085 ECH
Lele14g2205 14 27151027 27155085 Lele15g0144 15 860301 869580 hybridization
Lele14g2205 14 27151027 27155085 Lele16g0149 16 882058 903584 hybridization