Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2192 ATGCGGATGTGCAACTGGAAAAAGCGGCGTACAGTTTCAAGAACCAGGGCCAGAGCTAAAGCAAGTTGTGACTATCGGCCGGTCACCAGCCACCACTGCCGGGGTACAACGAGAATGAAGCAGGGAACGAGAGAAGTGGCGGGGGAAGTAAAAAGAAGAAAGAAGAGGCGAAAGAGTAATAACAGTGGAACCGAGGGCGGTGAACGTTCTGGTGATGCACCGGCGAACCAGGCACAAGTTCAAGTACTGGAAGCAGTTTCAATTCCAGGCCTATATCCAATCGGAATCCTCCAGGCTTCAAATTCAAAGCGTCATTCCCACGGCGCGTTTATAACGGACCCGTGTGGCGAGGTGACGACGGCGCCAACCCGAATTCCGATCATCCTTCCTGTGAGTCCCAGAGGTCGGTTGATGGAGTTCGCATTGAGCGACAACGCTCTGAAAATCTTTGCTCGCTGCGTCACTTGTCTCGCCCGCATTGGAAATGAGCTTTCTATTCAAGCCTCTTCCTCTCAGCTTGTTTTCCACGCTCTCAATTCATCGCGATCAGCATATCAATCCACTACCTTCAAACCAGGATTCTTTGATGTCTATACAGTATCCGGAAACCTGGCGCAATTTAGTGTACTTTTGAAGGCTATTTGTTCAGTTTTCAGGACACCTATAACAAATATTGATCGTTTGACCGTGAGACTGCCTGGTCCTGACGCTTCTAAAGTGCAGTGGACGTTGGAATGCTGCAGTGGTATGAGGAAAACCTATTGGATTACTTGCAATACCGAATCTGACATACAGCACTTATCCCTTGATAGGCAAAAACTCCCAAGTAACTTTGTTGTGAGGCCTCTAATTCTCAACAGGTTACTAGCTAATTTTCAGTCATCTCTCCAAGAGATTACCTTCATCGCAACAGAACCTCCCTCATTACCTTCTGATGCGGCAAGTGAAATTGGTGGAAAGGCTGTTGAACTTGGAAGTTATTTGGACCCAACCAAAGCCTATGAATATGGGCCTGATTCAAATTTTGATGTCACACTTGTATTGGCAACCATGTTGATATCTCAGCTACATGAAGGTGCCTTTGAAGTTCCACAGGCATCTACAAGAATCCATGCTCAAACTGAAAAGGGTGGATCTCATGTGCGGCAAGAGAATTGCAAAACAGTTGCATCTGAGCTTCCATCTGATCACACCCGTATATGGTCTGACCTATCAGATGGGATACAAGGTAATGATCAAGGCTTTTCCCAGCATCACCCTAGCAACTGGGTAGAATCTGAAGAGGACGATGATGATGGGGATGAGAACGAGCAGTATGTTCAGTCAACACCACCTTACTATGAGGAATCATAA 1353 0.4678 MRMCNWKKRRTVSRTRARAKASCDYRPVTSHHCRGTTRMKQGTREVAGEVKRRKKRRKSNNSGTEGGERSGDAPANQAQVQVLEAVSIPGLYPIGILQASNSKRHSHGAFITDPCGEVTTAPTRIPIILPVSPRGRLMEFALSDNALKIFARCVTCLARIGNELSIQASSSQLVFHALNSSRSAYQSTTFKPGFFDVYTVSGNLAQFSVLLKAICSVFRTPITNIDRLTVRLPGPDASKVQWTLECCSGMRKTYWITCNTESDIQHLSLDRQKLPSNFVVRPLILNRLLANFQSSLQEITFIATEPPSLPSDAASEIGGKAVELGSYLDPTKAYEYGPDSNFDVTLVLATMLISQLHEGAFEVPQASTRIHAQTEKGGSHVRQENCKTVASELPSDHTRIWSDLSDGIQGNDQGFSQHHPSNWVESEEDDDDGDENEQYVQSTPPYYEES 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2192 450 MobiDBLite consensus disorder prediction 402 421 - -
Lele14g2192 450 MobiDBLite consensus disorder prediction 27 76 - -
Lele14g2192 450 PANTHER DNA REPAIR PROTEIN RAD9 336 438 IPR007268 GO:0000077|GO:0030896
Lele14g2192 450 Pfam Rad9 150 334 IPR007268 GO:0000077|GO:0030896
Lele14g2192 450 SUPERFAMILY DNA clamp 147 256 - -
Lele14g2192 450 MobiDBLite consensus disorder prediction 397 450 - -
Lele14g2192 450 Gene3D - 139 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2192 Lele-ChrLele14 27072057 27077291 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2192 14 27072057 27077291 Lele13g2266 13 28776579 28779048 CCT
Lele14g2192 14 27072057 27077291 Lele14g2202 14 27120825 27123350 CCT
Lele14g2192 14 27072057 27077291 Lele15g0146 15 894153 896957 CCT
Lele14g2192 14 27072057 27077291 Lele16g0151 16 915661 918188 CCT
Lele14g2192 14 27072057 27077291 Lele15g0154 15 944941 951906 hybridization
Lele14g2192 14 27072057 27077291 Lele16g0163 16 968398 972103 hybridization