Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2183 ATGATGACCATGGAGGGAATGATGGACAAGGCCGTCCTCGACGACGTTATTCGGAGGCTGCTCGAAGGTAAAGGCGGGAAACAGGTCCAGCTTTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCCGCCAAATCTTGCTCTCCCAGCCTAATCTCCTCGAGCTCCATGCTCCTATCCACATCTGCGGTGATATACACGGACAGTACCCAGACTTACTGAGGCTATTTGAATATGGCGGCTACCCTCCAGCTGCAAACTACTTGTTTCTGGGGGACTACGTTGACAGAGGGAAGCAAAGCTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCCGACAAAATTCATCTCCTGAGAGGAAACCATGAAGAAGCTAAGATAAACCGGATATATGGGTTCTATGATGAATGTAAAAGGAGGTTCAATGTAAGGTTGTGGAAGATATTTTCTGACTGCTTTAACTGTTTGCCCGTGGCTGCACTCATTGCTGGCAAAATACTTTGCATGCACGGCGGTCTCTCTCCAGAATTGCAAACTTTGGATCAGATAAAGGAGATTACAAGACCTACCGAAGTTCCTGATGGTGGTCTCCTCTGTGATCTGCTTTGGTCCGATCCTGATCCCACTATTGAGGGCTGGGCAGAAAGCGACCGGGGGGTGTCGTGTACTTTTGGGCCTGATGCAGTCAGAGACTTTTTGGATAAGAATGATCTTGACCTCATTTGCAGAGGTCATCAGGTGGTGGAGGATGGATACGAGTTTTTTGCTAAACAAAGTTTAGTCACCATATTTTCTGCTCCAAACTACGGTGGGGAGTTTGATAATGCTGGTGCAATGTTGAGCGTTGATGAGTCTCTAGTATGTTCCTTCAAGATACTGAAACCCATCATGGATAAAGCATCCGGAAGTGGTTCAAAAATTAATTTTAAGAAGGCATGTATATCATAA 960 0.4604 MMTMEGMMDKAVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQILLSQPNLLELHAPIHICGDIHGQYPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFSDCFNCLPVAALIAGKILCMHGGLSPELQTLDQIKEITRPTEVPDGGLLCDLLWSDPDPTIEGWAESDRGVSCTFGPDAVRDFLDKNDLDLICRGHQVVEDGYEFFAKQSLVTIFSAPNYGGEFDNAGAMLSVDESLVCSFKILKPIMDKASGSGSKINFKKACIS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2183 319 CDD MPP_PP1_PPKL 12 299 - -
Lele14g2183 319 SMART pp2a_7 31 301 IPR006186 GO:0016787
Lele14g2183 319 SUPERFAMILY Metallo-dependent phosphatases 10 300 IPR029052 -
Lele14g2183 319 FunFam Serine/threonine-protein phosphatase 4 308 - -
Lele14g2183 319 Gene3D - 5 307 IPR029052 -
Lele14g2183 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 305 - -
Lele14g2183 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 122 127 IPR006186 GO:0016787
Lele14g2183 319 Pfam Calcineurin-like phosphoesterase 59 251 IPR004843 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 241 261 IPR006186 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 121 145 IPR006186 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 88 115 IPR006186 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 263 279 IPR006186 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 155 181 IPR006186 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 59 86 IPR006186 GO:0016787
Lele14g2183 319 PRINTS Serine/threonine phosphatase family signature 184 211 IPR006186 GO:0016787
Lele14g2183 319 Pfam Serine-threonine protein phosphatase N-terminal domain 13 56 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2183 Lele-ChrLele14 27028012 27029833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2183 38 247 Calmodulin-binding Proteins AT5G63870 32.800 3.59e-33 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2183 14 27028012 27029833 Lele15g0163 15 1001964 1004098 hybridization
Lele14g2183 14 27028012 27029833 Lele16g0172 16 1020598 1022544 hybridization