Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2182 ATGAAATCGTTCTATACAGACGGAAAAGAGAAGGGGATAGATCTCAAAGCTGGCGGGAAGAGCAAGAAGACCAAAAGAACTGCACCCAAGTCCAATGATATCTATCTTAAGCTCCTTGTCAAGCTTTATCGCTTTCTAGTACGGAGAACTGAAAGCAGTTTCAATGCTGTAATACTCAAGCGTCTTTTCATGAGCAAAGTTAACAAGCCTCCACTTTCTCTTTCAAGATTGATAAAGTTCATGAAGGGGAAGGAAGATAAGACTGCAGTGTTGGTGGGGACTGTGACTGATGATATACGAGTTTATGAAGTTCCTCCTTTGAAAGTTGCAGCACTCCGGTTTACAGAGACGGCACGTGCAAGGATAGATAAGGCTGGCGGTGAGTGCTTGACTTTTGATCAGCTGGCTCTCAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCCAAGAATTCTCGTGAAGCTGTGAAGCATTTTGGTCCAGCACCTGGGGTGCCGCACAGCCACACCAAGCCTTATGTGCGATCAAAGGGAAGGAAGTTCGAGCGTGCGAGAGGAAGGAGGAACAGCAAAGGATTTAGGGTTTAA 594 0.468 MKSFYTDGKEKGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESSFNAVILKRLFMSKVNKPPLSLSRLIKFMKGKEDKTAVLVGTVTDDIRVYEVPPLKVAALRFTETARARIDKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2182 197 FunFam 60S ribosomal protein L18 11 197 - -
Lele14g2182 197 MobiDBLite consensus disorder prediction 174 197 - -
Lele14g2182 197 MobiDBLite consensus disorder prediction 161 197 - -
Lele14g2182 197 Pfam Ribosomal protein 60S L18 and 50S L18e 12 197 IPR021131 -
Lele14g2182 197 SUPERFAMILY Ribosomal proteins L15p and L18e 30 149 IPR036227 -
Lele14g2182 197 PANTHER 60S RIBOSOMAL PROTEIN L18 12 197 IPR000039 GO:0003735|GO:0005840|GO:0006412
Lele14g2182 197 Gene3D - 11 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2182 Lele-ChrLele14 27025097 27027502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2182 13 197 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 4.05e-103 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2182 14 27025097 27027502 Lele05g0205 05 1102208 1111879 CCT
Lele14g2182 14 27025097 27027502 Lele06g0012 06 72926 82490 CCT
Lele14g2182 14 27025097 27027502 Lele07g0207 07 1113353 1122884 CCT
Lele14g2182 14 27025097 27027502 Lele08g0013 08 68697 78267 CCT
Lele14g2182 14 27025097 27027502 Lele14g2182 14 27025097 27027502 ECH
Lele14g2182 14 27025097 27027502 Lele15g0164 15 1007329 1008940 hybridization
Lele14g2182 14 27025097 27027502 Lele16g0173 16 1022836 1025853 hybridization