Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2181 ATGATTATTTGTTATCATATTATTGCAGGAAGGTGGCCGGAGGAGCTGCTTAATATACCCAAGATGTCCGCGGATGGACAGAACAAAAGGAGAATAGCCATCATTGGCGTCTCTGCGGTGTTACTGGTGGGCATGGTGGTGGCCGTGACGGTCGGCATGACGTGGAAGGCATCAGATTCCGATGAGGAAGACAATTCCGGTAAGACCGTGTCTAACAAAGTGAAAGCAGTGCAGAGCCTGTGCGCCCCCACCGACTACAAGGACGAATGCGAGGAGAGCCTGTCGGAGGACTCCATCAACACCACCGATCCGAAAGAACTCATCATGATGGCCTTCAACGTAACCATCAAGAAAATCGAGAAGGGTCTTCGTGAATCCGACACCTTGCACGAGGCCGAGAGGGATCCCCGAGCCAAGGAAGCCCTCCAAATCTGCAAGGACCTCATGGAACTTTCCATTGGCGAGTTCAGGAAATCCCTCGGTACCTTCGAGACCTTCGATTTCTACAACCTCGACAAGATTCTCATGAACCTCAAAGTTTGGCTCAGCGGAGCCATCACTTACCAGGAAACCTGCATTGAAGGCTTCGAGGAAGCAAAGAGCGACGCCGGTCAGAAGATGAAGCAGGCGCTCACGGCCGCCATGCACATGAGCAGCAACGGCCTCGCCATAGTCAACGACATGGCCGAAGCTTTATCCAGTCTGCATATCACAAAACAAGGAAGGCGTCTGCTTAATGATCAGGAGGATGGCAGCGAAGATCATCGCGAGGAGGCAAGTCCGAACGAAGACGGGGCGAGACCCGACGGCGACTTCGAGTTCCCCTCGTGGATCGATGAAAATCCTGCCGCTCGGAGACTGCTGACGAGCGAGCATAAAAGCAAACTGAAGCCCGATGTGGTGGTGGCGAAAGACGGGAGTGGGAAATACAAGAAAATCAAAGACGCGCTAAAGCATGTGCCGAAGAACAACAAAAAGCCGTTTGTGATCTACATTAAGGAAGGGGAGTACAAAGAGTATGTGGAGGTGGATAAGCACATGACGTACGTTGTGTTCGTGGGGGATGGTGGCAACAAGACCCGCATCACCGGCAACAAGAATTTCGCCGACGGAATAGGCACCTATAAGACCTGCACGGTGGCGGTAGCAGGGGACCACTTCATCGCCATCAACATGGGGTTCGAAAACTCGGCCGGTCCTGACGGACATCAGGCCGTGGCATTGAGGGTTCAATCCGACTTCTCCATTTTCTACAGATGCCAATTGGATGGGTACCAGGACACGCTGTACGCGCACACCATGCGTCAATTCTACAGGGACTGCGTGATCACCGGCACCATAGACTTCATCTTCGGGGACGGCGCCGTAGTGATGCAGAACTGCACGTTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATAGTGACGGCGCAAGGGAGGAAGGAGAGGCACCAACCGTCAGCGCTAGTAATCCAAGGAGGGTCCATAGTGTCGGACCCAAAGTTCTATAAAGTGAGGTTCGAGAACAAGGCGTACCTAGCGCGGCCTTGGAAGAACTTCTCAAGGTTGATCATAATGGAGACCTTCATAGATGACCTGATACAGCCAGAAGGGTTTCTCAAGTGGGACCCTAACTCCACATCGTACAAGACATGCTGGTACGGTGAGTTCAACAACACAGGGCCAGGCGCCGACATGAGTCATCGCGTCAAGTGGAATGGGATCAAGAATCTGACGGCACAACATTCTGTGGATTTCACGCCCTTGAGGTACTTCAAGACGGATTACTGGATTAGGGAAACTAGGATTCCTTACAATCCCGGCCCCATGTACTACCCTCCAGTTACTGCTAAAAATGTCTCCTCTCAGTGA 1875 0.5259 MIICYHIIAGRWPEELLNIPKMSADGQNKRRIAIIGVSAVLLVGMVVAVTVGMTWKASDSDEEDNSGKTVSNKVKAVQSLCAPTDYKDECEESLSEDSINTTDPKELIMMAFNVTIKKIEKGLRESDTLHEAERDPRAKEALQICKDLMELSIGEFRKSLGTFETFDFYNLDKILMNLKVWLSGAITYQETCIEGFEEAKSDAGQKMKQALTAAMHMSSNGLAIVNDMAEALSSLHITKQGRRLLNDQEDGSEDHREEASPNEDGARPDGDFEFPSWIDENPAARRLLTSEHKSKLKPDVVVAKDGSGKYKKIKDALKHVPKNNKKPFVIYIKEGEYKEYVEVDKHMTYVVFVGDGGNKTRITGNKNFADGIGTYKTCTVAVAGDHFIAINMGFENSAGPDGHQAVALRVQSDFSIFYRCQLDGYQDTLYAHTMRQFYRDCVITGTIDFIFGDGAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVSDPKFYKVRFENKAYLARPWKNFSRLIIMETFIDDLIQPEGFLKWDPNSTSYKTCWYGEFNNTGPGADMSHRVKWNGIKNLTAQHSVDFTPLRYFKTDYWIRETRIPYNPGPMYYPPVTAKNVSSQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2181 624 SUPERFAMILY Pectin lyase-like 297 607 IPR011050 -
Lele14g2181 624 PANTHER PECTINESTERASE 39 600 - -
Lele14g2181 624 CDD PMEI-like_3 79 229 - -
Lele14g2181 624 SMART PMEI_2 72 224 IPR006501 GO:0004857
Lele14g2181 624 MobiDBLite consensus disorder prediction 245 274 - -
Lele14g2181 624 Pfam Plant invertase/pectin methylesterase inhibitor 76 224 IPR006501 GO:0004857
Lele14g2181 624 TIGRFAM PME_inhib: pectinesterase inhibitor domain 69 227 IPR006501 GO:0004857
Lele14g2181 624 Gene3D - 293 609 IPR012334 -
Lele14g2181 624 FunFam Pectinesterase 293 610 - -
Lele14g2181 624 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 228 IPR035513 -
Lele14g2181 624 Pfam Pectinesterase 299 594 IPR000070 GO:0030599|GO:0042545
Lele14g2181 624 FunFam Pectinesterase 73 229 - -
Lele14g2181 624 MobiDBLite consensus disorder prediction 245 275 - -
Lele14g2181 624 ProSitePatterns Pectinesterase signature 2. 443 452 IPR033131 -
Lele14g2181 624 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 229 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2181 Lele-ChrLele14 27022589 27024463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2181 25 623 Carbohydrate Esterase AT3G05610 46.423 0.0 574