Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2179 ATGGCCCAGCTCCTTCATTTCCTTTTCATCCCCATCCTTTTACCTTGCTTCACAATTGGAGCTTTCTTAGATGAAATCCCCTCCGATACCAGTAACCAGCTAGACTTGCACGCCATGATTGCCCAGGTCTGCGTGGACATCCAAGATCAAACCACATGCCTCTCCAATATCCAGAACGAGGTCGTCAAGCATGGCCCTCCCACCCCATCCTCAGTTGTAACTGCCGCACTCCGAGCCACTCTCAACGAAGCCATGGGCGCCATTGACAAATTCTCCAAGTTCAGCACTTTATCCATCAACTATCGTGAGCAAGTAGCCATCCAAGACTGCAAGGAGCTCCTTGATTTCTCAGTGTCGGAGCTGGCCTGGTCGTTGGGCGAGATGAGGAGAATTCGTGCAGGTGATAAAACCGTTGATTACGACGGAGACCTCCAGGCTCGACTGAGTGCAGCGCTCAGCAACCAAGACACGTGTCTGGAGGGGTTCGAGGGCACCGACCGGCGTCTTCAGGGTTACATCAGCGGAAGCTTGACACAAGTCACACAGCTTATAAGTAATGTTTTGGCATTGTACACTCAATTGCATAGCTTACCCTTTAGGCCTCCGGCGAATAAAACCAGATTACCAAATGATCGGAGCTCGGAGTTTCCGGAATGGATGACGGAGGGCGATCAAGAGCTGCTCAGATCTCGGCCACGAGGGTGCAAGCTGATGCTGTTGTGGCGTTGGATGGGAGCGGCCATTACCGTTCCATCTCGGAAGCTGTCAACGCAGGTCCAAGCCAAAGCAACCGGAGCTGTGTCGGGGAAGGGATTCATAGCAAGGGACATGTCATTTCGAAACACAGCAGGACCAGAGAACCATCAAGCAGTGGCCCTGAGCGTGGATTGA 891 0.5264 MAQLLHFLFIPILLPCFTIGAFLDEIPSDTSNQLDLHAMIAQVCVDIQDQTTCLSNIQNEVVKHGPPTPSSVVTAALRATLNEAMGAIDKFSKFSTLSINYREQVAIQDCKELLDFSVSELAWSLGEMRRIRAGDKTVDYDGDLQARLSAALSNQDTCLEGFEGTDRRLQGYISGSLTQVTQLISNVLALYTQLHSLPFRPPANKTRLPNDRSSEFPEWMTEGDQELLRSRPRGCKLMLLWRWMGAAITVPSRKLSTQVQAKATGAVSGKGFIARDMSFRNTAGPENHQAVALSVD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2179 296 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 195 IPR035513 -
Lele14g2179 296 Pfam Plant invertase/pectin methylesterase inhibitor 39 190 IPR006501 GO:0004857
Lele14g2179 296 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 195 IPR035513 -
Lele14g2179 296 TIGRFAM PME_inhib: pectinesterase inhibitor domain 37 195 IPR006501 GO:0004857
Lele14g2179 296 SMART PMEI_2 35 190 IPR006501 GO:0004857
Lele14g2179 296 Pfam Pectinesterase 259 296 IPR000070 GO:0030599|GO:0042545
Lele14g2179 296 CDD PMEI-like_3 43 196 - -
Lele14g2179 296 Gene3D - 242 296 IPR012334 -
Lele14g2179 296 PANTHER PECTINESTERASE 18 295 - -
Lele14g2179 296 SUPERFAMILY Pectin lyase-like 260 295 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2179 Lele-ChrLele14 27018480 27019601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2179 35 296 Carbohydrate Esterase AT3G05620 36.391 3.49e-56 188