Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2171 ATGAAGATAGGAACCATGTTTTTTTCATTATTGCAAGTACCCAGATGCAGAATACACAGCATAGCTAATTATTGGGATGAAACATTCCATAGTTCAAGTAAGATCTATGGTAATAATTCTAGTGTCAGGCTACTTTGTTCTAGAATTTATGGGCAGGATGGAGGACACAGTAAGAAGTGGAGTAGTAGAAGACCTGTAACTACAACAACAGAAGGAAAAGGAAATAAACAATCCACCTGGAGCACCGGATCAAGAATCATCAAGCCTGAAATTTCAAGCGAAACAGTATTAGCAAGTGCTGCATTGAATGTAAATAAAACACAGCTAGTTCATTTACAGGATATTCAATACTGCGACATACAGCAGGAGATTGCTCAGAATAAAGACATATCCAGCAAAGTCACTGTTATTGTTTTTGATATTGAGACTACTGAGCTTAGCAGAGTACAAGGACGGATCATTGAGATTGCACTCCGAGATCTTCAAGGTGGTGAGAATAGCACCTTCCAAACTCTTGTAAATCCTGGACGAGATGTTACTAATTCCTATATTCATGGCATTACCACTAAGATGGTTAACAGACCTGATGTTCCAAGGATGGAGGACCTGATTCCCATCTTATTACAGTATGTTCAAAGCCGTCAGAAGCCTGGTGGCTATATATTATGGGTTGGTCACAATGCTCGCTGTTTTGATGTACCCTTCATCATTAATGAATTTAGACGTTGTTCTGTAGAAATTCCTCCTAATTGGCTATTTGCAGATACCCTTCCGTTGGCACGTGAATTAAAGAAGTCAGTAGGAACAAAACTTACTTCAACAACACTAGAGGCCCTTCGTGAGCTCTATAGTATTCAAGTCGATGGAGCAGCTCATAGGGCCATGGTAGATGTGAATACTTTGTCAAGGATACTTCCTAGATTGACCTTTGATCTCAAGTTGACCTTATCTGGCCTTGTCCAAAGATCATTTACCGAATCAGATTTGGTCAACTCTAAGAAAAAGAAGAGTTCAGGCTAG 1020 0.3961 MKIGTMFFSLLQVPRCRIHSIANYWDETFHSSSKIYGNNSSVRLLCSRIYGQDGGHSKKWSSRRPVTTTTEGKGNKQSTWSTGSRIIKPEISSETVLASAALNVNKTQLVHLQDIQYCDIQQEIAQNKDISSKVTVIVFDIETTELSRVQGRIIEIALRDLQGGENSTFQTLVNPGRDVTNSYIHGITTKMVNRPDVPRMEDLIPILLQYVQSRQKPGGYILWVGHNARCFDVPFIINEFRRCSVEIPPNWLFADTLPLARELKKSVGTKLTSTTLEALRELYSIQVDGAAHRAMVDVNTLSRILPRLTFDLKLTLSGLVQRSFTESDLVNSKKKKSSG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2171 339 MobiDBLite consensus disorder prediction 53 81 - -
Lele14g2171 339 Gene3D - 134 316 IPR036397 GO:0003676
Lele14g2171 339 SUPERFAMILY Ribonuclease H-like 135 308 IPR012337 -
Lele14g2171 339 CDD DEDDh 137 305 - -
Lele14g2171 339 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 134 318 - -
Lele14g2171 339 Pfam Exonuclease 137 303 IPR013520 -
Lele14g2171 339 MobiDBLite consensus disorder prediction 61 81 - -
Lele14g2171 339 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 58 331 IPR040393 GO:0008408
Lele14g2171 339 SMART exoiiiendus 135 314 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2171 Lele-ChrLele14 26984703 26986333 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2171 14 26984703 26986333 Lele15g0178 15 1067021 1070391 hybridization
Lele14g2171 14 26984703 26986333 Lele16g0189 16 1078713 1083866 hybridization