Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2160 ATGGCTCACACCAGTAACAATGTCGCCGGGGTCGACAACACGTTCAGAAGAAAATTTGATAGAGAGGAGTATTTAGAACGAGCTCGGGAGCGTGAGAGGCAGGAAGAGGAGGCTCGATCTAGACCTAAAACCAAAGGTCCTCCAGTGCAGAGGAAACCCTTGAAACATAGAGATTATGAGGTGGACCTTGAATCCCGCTTGGGGAAGACTCAGGTTGTTACTCCAGTTGCACCTCTAAGCCAGCAGGCCGGATACTACTGCTCAGTTTGTGAGTGTGTGGTAAAGGATTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAACGAGCTCTGGGAATGTCTATGCGAGTAGAACGTGCTTCTCTGTCACAGGTTCAGGAACGATTTGAAGTTCTTAAAAAGCGGAAAGCTCTTGGAAGCTTCACAGAGCAAGATCTGGATGATCGGATCTTAAAACAGCAGCAAGAAGAGGAAGAAAGAAAGCGACAGAGACGGGAAAGGAAGAAAGAGAAGAAGAAAGAGAAGGAAGTTGAAGAAGCACCTGAAACAGATCCTGATGTTGCCGCTATGATGGGGTTTGGTGGCTTTCGGTCATCCAAGAAATGA 612 0.4641 MAHTSNNVAGVDNTFRRKFDREEYLERARERERQEEEARSRPKTKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLSQVQERFEVLKKRKALGSFTEQDLDDRILKQQQEEEERKRQRRERKKEKKKEKEVEEAPETDPDVAAMMGFGGFRSSKK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2160 203 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 10 203 IPR040107 GO:0000398|GO:0005681
Lele14g2160 203 MobiDBLite consensus disorder prediction 20 57 - -
Lele14g2160 203 MobiDBLite consensus disorder prediction 20 44 - -
Lele14g2160 203 SUPERFAMILY beta-beta-alpha zinc fingers 80 121 IPR036236 -
Lele14g2160 203 MobiDBLite consensus disorder prediction 151 203 - -
Lele14g2160 203 FunFam zinc finger matrin-type protein 2-like 79 117 - -
Lele14g2160 203 MobiDBLite consensus disorder prediction 151 184 - -
Lele14g2160 203 Pfam Zinc-finger of C2H2 type 85 109 - -
Lele14g2160 203 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Lele14g2160 203 Gene3D Classic Zinc Finger 79 117 - -
Lele14g2160 203 Coils Coil 21 41 - -
Lele14g2160 203 Coils Coil 153 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2160 Lele-ChrLele14 26940790 26942980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2160 4 147 C2H2 Transcription Factor Family AT3G05760 81.250 5.73e-85 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele14g2160 zf-C2H2_jaz 1.9e-06 CL0361