Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2152 ATGGTTATTGCTACGGCCGCCCTCTCTAGCTATCCTTTCAAATTTTCGGTTCGCCAAGCTTCTCTATCGTCGCCGTCTTCGGCTCGAATTCGCCATCGCTTCCCTTCTAGCCGATGGTTGAACTTTAAGCATCCTTGTGCCTCTCATAGGTTTGACTGTTCAAGATGTTTAATAACAAATACTGAGATACAATTGGATCATGTCACAACCGATGAGGTTCAAGGAGAGTCATCAACTGTTGAACCTAATTGTCCGGTGCCAATAGTTAAACTCAACTCTGATATTCTTGAGACTGAGTCCCTGAATCTACTGACTGAAGGCACATATGTAGATAGTCTCTTGACAGCATTACCTGTTTTGTCGGAAAAGGAGCAACATGTCCTTGCAGCTACACCAGCTCACCCAGCTGCATTATACGCAGATGTTAACTTGAAGGGTATATGTTTTTCAGCTTTCTATGCAAACTGCATAGCTGGAAATTTAGTTGAACAGCTTTGGAATTTCACCTGGCCTTCTGCCATTGCCTTGATTCATCCAAGCCTTTTACCTGTTGCGGTAATGGGTTTTTTCACGAAAGTTGCTATAATTGTTGGAGGCCCCCTGGTTGGGAAATTTATGGACCATTTTCCTAGACTATCTGCATATAATTGCTTGAATATCATTCAGTTGCTGTCTGCGACAATGATCATTCATGCTCATTCTGCTCGTCCTACCTCTGTGACTTCCATGCTTCTATGCCCTTGGTTTGTCGTATTAGTTTCAGCTGGGGCTATTGAAAGGCTATGTGGGGTTGCAGTGGGGGTTGCAAATGAACGTGACTGGGTTGTATTGCTGGCAGGAGTGAATAGGCCAATTGCACTTGCACAGGCAAATGCAGTACTAAATCGAATTGATCTCATGTGTGAGATAGTTGGGGCATCACTTTTTGGAGCTCTCCTTTCTAAGTTTCATCCAGTAACCTGCTTGAAATTTGCTGCTGGCTTAATGATGGGATTACTTCCTGTTACAATTGCCCTCACATGGCTGGCGAACAAGCTCTCCACTGGGGTTCTTGACCGGTCTAAATCTTCACAAACTTGTTGCAGAGTATTCACTGAAGATTCTGGGCCACATGCTTACAATATAGAAGCCATAAAGCTTGGCTGGACGGAATATCTGGGCCAGCCAGTTCTTCCAGCAAGTCTTGCGTGGGTGCTCCTATACTTCAATGTTGTCCTTGGACCAGGAAGTTTGATGACAGCATTTTTAACACAGCGTGGATTAAATCCCTCTATAATTGGAGGATTCAGCGGATTGTGTGCTTTTATGGGTGTTGCTGCAACATTTGTATTGTCACGGTTAGGACACATGTCATATGATGTTGTTGGTGCTCAGATTGTTCAGACGGGGATCCCATCATCCAAAGCAAATCTCATAGGGACGACAGAGGTTGCTGTTGCTAGTTTGGCAGAGTCTATAATGCTGGGAGTTGCCATAATTGCAAATGACCCTTCTCATTTTGGGTTTTTGGCAATGTTGTCTCTTCTATCTGTGGTTGTTGTTTGTTGCTTAGCTGCCGCAATTGATGCAAAGAAGAGCTGGATGCTTCTTGATCTGCGGGCCTTTTTAACTGATAGAACAGATCATGGCAAACTAACGTTATCGCTATCATTCTTTTTATTGCTTGAAAGAAAGGTGGGTCATACGTCTTCTTCTTCTTGCCTTTGGTTAATTACTTTACAGCTGAATATCCTTAATATGTATGCGTGCGTGGGTGTGTATTTTGCTCCTCAAAATATGTACACGCGAGTCAAGGATATGGGTGCTTCGTTTTATTTAGGAGCTTTTCTTCTGGCTTTCAGCTACCTTAGCTTCTTCCCTGCCATCGTCGCTGCAAAGCATGGACCGATAACAAGACACTATACATTTGATGTAAGGATGCAAAATGTGACACGTTTATGCCACACGAAGAGCACGGTAACGGTGAATGGCAAGTTCCCTGGGCCTCCCATCGTTGCTAGAGAAGGAGACCGAGTAGTGGTTAAAGTGGTTAATAATGTTCAATACAACGTTAGCATCCACTGGCACGGGATTCGACAACTTCAAAGCCAATGGGCAGATGGACCAGCATACATAACTCAGTGCCCAATCCAAACGGGGCAGAGCTACGTTTACAACTTCACAATAGCTGGCCAAAGGGGCACTTTGTTTTGGCACGCTCACATCTCATGGCTCAGAGCTACCCTTTATGGACCCCTTATCATCCTTCCCAAGCCTGGAGTTTCTTACCCTTTTCCCAAGCCATACAAGGAAATTCCCATCTTGTTTGGTGAGTGGTGGAATGCAGATATAGAGGCAGCAATAAGCCAAGCTCTTCAGACTGGTGGTGGCCCTAACGTATCCGATGCATACACCCTCAACGGATTTCCTGGCCCATTGTACAATTGCTCTCAGAAAGGTGATACCTTCAAGCTGAAGGTGAGACCAGGGAAAACTTACCTGCTCCGATTGATCAATGCTGCACTCAACGATGAGCTCTTTTTCAGCATAGCAAATCACAGCCTCATAACTGTGGAAGCCGATGCGCTGTACGTGAAACCTTTTAAAGCCGACATACTGCTGTTAGGCCCAGGTCAGACTACAAATGTTCTCTTGAAAGCTAAACGAGACCCACCAAATCGCCGTTTCCTTATGGCAGCAAGACCTTATAACACTGGCCAAGGCACTTTCGATAACACCACCACTGCAGGTATACTTGAGTACGAAGGCACTTCAAAATCCTCTCCTCTGATCAGACCAACCCTCCCTGCCATAAACGACACTAATTATGCTGCCAATTTCAGTGCTAAATTCCGCAGCTTAAACAAGCCTCAAGTGCCTCAAACTGTAGACAAAAGCTTTTTCTTCACTGTGGGCCTCGGAAGCAGCCCCTGTCCTAAAAACCAGACTTGTCAAGGCCCTAATGGTACCAAGTTCGCTGCTTCCGTGAACAACATATCCTTCGCAATGCCCACCACTGCAATCCTACAGTCCTATTATTCCAGAAAATCAAATGGGGTTTTCACCACTGATTTCCCAACCCGTCCTCTGATTCCTTTTAATTACACGGGCACCCCACCCAACAACACAATGGTCATGAACGGTACCAAAATGGTGGTGCTTCCGTTCAACACGAGTGTGGAATTAATAATGCAGGACACAAGTATTCTTGGGGCCGAGAGCCACCCTCTGCATCTCCACGGATATAACTTCTATGTGGTAGGGCAGGGTTTTGGTAACTTCGACCCCAAGAAAGACCCAGCTAGTTATAATCTTGTGGACCCGGTGGAAAGAAACACTGTGGCAGTGCCGTCTGGTGGGTGGGTAGCTATTCGTTTCTTCGCTGATAATCCAGGAGTGTGGTTTATGCACTGCCATTTCGAAGTGCATCTGAGCTGGGGGTTGAAGATGGCGTGGATCGTGCTCGATGGAGAGCTACCGAACCAGAAGTTACCTCCTCCGCCCGCCGATCTTCCCAAGTGTTGA 3504 0.458 MVIATAALSSYPFKFSVRQASLSSPSSARIRHRFPSSRWLNFKHPCASHRFDCSRCLITNTEIQLDHVTTDEVQGESSTVEPNCPVPIVKLNSDILETESLNLLTEGTYVDSLLTALPVLSEKEQHVLAATPAHPAALYADVNLKGICFSAFYANCIAGNLVEQLWNFTWPSAIALIHPSLLPVAVMGFFTKVAIIVGGPLVGKFMDHFPRLSAYNCLNIIQLLSATMIIHAHSARPTSVTSMLLCPWFVVLVSAGAIERLCGVAVGVANERDWVVLLAGVNRPIALAQANAVLNRIDLMCEIVGASLFGALLSKFHPVTCLKFAAGLMMGLLPVTIALTWLANKLSTGVLDRSKSSQTCCRVFTEDSGPHAYNIEAIKLGWTEYLGQPVLPASLAWVLLYFNVVLGPGSLMTAFLTQRGLNPSIIGGFSGLCAFMGVAATFVLSRLGHMSYDVVGAQIVQTGIPSSKANLIGTTEVAVASLAESIMLGVAIIANDPSHFGFLAMLSLLSVVVVCCLAAAIDAKKSWMLLDLRAFLTDRTDHGKLTLSLSFFLLLERKVGHTSSSSCLWLITLQLNILNMYACVGVYFAPQNMYTRVKDMGASFYLGAFLLAFSYLSFFPAIVAAKHGPITRHYTFDVRMQNVTRLCHTKSTVTVNGKFPGPPIVAREGDRVVVKVVNNVQYNVSIHWHGIRQLQSQWADGPAYITQCPIQTGQSYVYNFTIAGQRGTLFWHAHISWLRATLYGPLIILPKPGVSYPFPKPYKEIPILFGEWWNADIEAAISQALQTGGGPNVSDAYTLNGFPGPLYNCSQKGDTFKLKVRPGKTYLLRLINAALNDELFFSIANHSLITVEADALYVKPFKADILLLGPGQTTNVLLKAKRDPPNRRFLMAARPYNTGQGTFDNTTTAGILEYEGTSKSSPLIRPTLPAINDTNYAANFSAKFRSLNKPQVPQTVDKSFFFTVGLGSSPCPKNQTCQGPNGTKFAASVNNISFAMPTTAILQSYYSRKSNGVFTTDFPTRPLIPFNYTGTPPNNTMVMNGTKMVVLPFNTSVELIMQDTSILGAESHPLHLHGYNFYVVGQGFGNFDPKKDPASYNLVDPVERNTVAVPSGGWVAIRFFADNPGVWFMHCHFEVHLSWGLKMAWIVLDGELPNQKLPPPPADLPKC 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2152 1167 Pfam Multicopper oxidase 638 751 IPR011707 GO:0005507
Lele14g2152 1167 PANTHER MULTI-COPPER OXIDASE 625 1155 IPR045087 -
Lele14g2152 1167 SUPERFAMILY Cupredoxins 758 946 IPR008972 -
Lele14g2152 1167 CDD CuRO_1_LCC_plant 634 750 IPR034288 GO:0005507
Lele14g2152 1167 TIGRFAM laccase: laccase 631 1167 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lele14g2152 1167 Gene3D - 622 750 IPR008972 -
Lele14g2152 1167 SUPERFAMILY Cupredoxins 630 775 IPR008972 -
Lele14g2152 1167 CDD CuRO_2_LCC_plant 765 914 IPR034285 -
Lele14g2152 1167 Pfam Multicopper oxidase 1029 1149 IPR011706 GO:0005507|GO:0016491
Lele14g2152 1167 Gene3D - 762 949 IPR008972 -
Lele14g2152 1167 FunFam Laccase 762 950 - -
Lele14g2152 1167 ProSitePatterns Multicopper oxidases signature 1. 1125 1145 IPR033138 -
Lele14g2152 1167 CDD CuRO_3_LCC_plant 1013 1150 IPR034289 GO:0005507
Lele14g2152 1167 Pfam Ferroportin1 (FPN1) 152 444 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele14g2152 1167 SUPERFAMILY Cupredoxins 953 1167 IPR008972 -
Lele14g2152 1167 FunFam Laccase 620 750 - -
Lele14g2152 1167 ProSitePatterns Multicopper oxidases signature 2. 1130 1141 IPR002355 GO:0005507
Lele14g2152 1167 Pfam Multicopper oxidase 764 916 IPR001117 -
Lele14g2152 1167 Gene3D - 973 1167 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2152 Lele-ChrLele14 26899718 26908835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2152 169 511 Organic Solute Cotransporters AT2G38460 23.982 5.88e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2152 14 26899718 26908835 Lele06g0041 06 301712 302434 CCT
Lele14g2152 14 26899718 26908835 Lele08g0040 08 272628 279519 CCT
Lele14g2152 14 26899718 26908835 Lele15g0195 15 1152153 1156574 hybridization
Lele14g2152 14 26899718 26908835 Lele16g0205 16 1163032 1167323 hybridization