Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2149 ATGGGGGATCAGGCAATGTGGAAGAAACCTGGCCACATGGCATGGCCATATCCTGTTAGTTCAGAGACGTGCCCAGAAGGCAATCAGAGAAAGCGTAGGACAATCGGGCACGATGTCAGCAACGAACAGAATTCGCTCGCTCCGGTTCCGTGGAGATCCGAGACAGAGCAGCGTACCTATTCCTCCAAGCTCGTCGAAGCTCTGCGCCGCGTTCTTCGCCAGAGTCCTACTTCCAAGGCCAAGCCTCGCCTAGGACGTGATGTTCGTGAGATTGCCGACAGGGTTCTAGCGGTGACGGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATACTGGCCTCTCCGCTCAGTCGGAGAAAGTTCCAGAGGCAGCATAGGAAGGTCAAGAAGGCGGCGAACGGATTGAAGAAACCAGAGGTTAGAAGAGAGAGAAGAAGGCTGCCGGCTGTGCAGAGGAAGGCGCGGGTCCTCAGCCGGTTAGTTCCCGGTTGCCGGAAGGTCTCGTTTCCGAGTCTTCTGGAAGAAACCAGTGATTATATTTCGGCCTTGGAAATGCAAGTGCGGGCCATGACGGCACTCACCGAGTTACTCGGAGGTGGCGACGGTCGGGCTTGA 612 0.5703 MGDQAMWKKPGHMAWPYPVSSETCPEGNQRKRRTIGHDVSNEQNSLAPVPWRSETEQRTYSSKLVEALRRVLRQSPTSKAKPRLGRDVREIADRVLAVTAKGRTRWSRAILASPLSRRKFQRQHRKVKKAANGLKKPEVRRERRRLPAVQRKARVLSRLVPGCRKVSFPSLLEETSDYISALEMQVRAMTALTELLGGGDGRA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2149 203 MobiDBLite consensus disorder prediction 127 146 - -
Lele14g2149 203 CDD bHLH_AtIBH1_like 140 193 IPR044549 GO:0006355
Lele14g2149 203 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 52 196 IPR044660 GO:0006355
Lele14g2149 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
Lele14g2149 203 MobiDBLite consensus disorder prediction 39 54 - -
Lele14g2149 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 196 IPR036638 GO:0046983
Lele14g2149 203 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2149 Lele-ChrLele14 26889353 26891456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2149 51 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 51.899 2.07e-37 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0227 05 1270686 1271294 Lele14g2149 14 26889353 26891456 CCT
Lele14g2149 14 26889353 26891456 Lele14g2149 14 26889353 26891456 ECH
Lele14g2149 14 26889353 26891456 Lele15g0200 15 1173717 1174325 hybridization
Lele14g2149 14 26889353 26891456 Lele16g0209 16 1179154 1179756 hybridization