Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2125 ATGGGAAGGCACTCTTGCTGTTTCAAGCAAAAGCTAAGGAAAGGCCTCTGGTCACCAGAGGAAGACGAGAAGCTTCTCAATTATATCACCAAGCATGGCCATGGATGTTGGAGCTCTGTCCCCAAACTAGCTGGTACTTTCTGTCTCTCCCTCATACTGCACTTCATCTTGTACTCCATGGTAGTGTACAAAACTCTTTTCAAGTTTAACCCTCTCTCTCTCTCTCTCTCAATGAATATGGCAGGCTTGCAGAGATGTGGCAAGAGCTGCAGATTGAGGTGGATCAATTATCTGAGGCCTGATTTGAAGAGAGGAGCATTCTCTCAACAGGAAGAGAATTTGATTATTGAGCTCCATGCAGCACTCGGAAACAGGTGGTCTCAAATTGCAGCCCAGTTACCGGGAAGAACCGACAACGAGATCAAGAATCTATGGAATTCCTGCCTGAAAAAGAAGCTTAGGCAAAGAGGCATTGACCCAAACACCCACAAGCCTCTCTCCGAGGTTGAGAACCACAAGGAGAAGCAGACCAATCAGAAAACATTGGTATTCAATGACCAGACTTTGGCTCATGAGTCGACAAAACCAAAATCTGCACAGCTATACCCTCCTCTTCAAGTTTCATCTCAATCCAACTTCAACAACAGCAACAATAATTCCCACCATGATCTATTTCTGGATCGATCTTATTTCTCTTTCCAACTCTTCAACGACTATGCAACAAATCCTGACTCCAGTACTTCTCTTTGCTTCATTCCTAGTTCTACCAGTTCCTCTCAGGTTATGTCAGACCTTAATTCGGCTGTCTCTACCACTATGCTCCATTCAATTTTGCCCACAAATGCAAATCCCACTCTTAGCCTCCAATCTGATCATAACAATCCCTCTGCTCATATTCATGGTGTTCATCAGGCTTGGGAAGCCACCGCCTTTAATAACAACGGAGGCAAAAACAGTGGGAGCAATAGTGATATACCGTTACAAAACAGCAGTGACTTCATGGACAACAACACTTTAACGTGGGAAAAGGATTCCCATGTTAACAACGTGGTACCCTTACAAGCAGAACAAGAAGACATAAAATGGTCTGAGTATCTTAATAATACCCCATTTTTTCTAGGCAATCAAATCTCTCAATCTATCTACAGTGAGGTTAAACCAGAAACGGGGTTCATAACAGATGAGGCGACTACTAGTTGGCACCATAATAGCCAGCAGCATCCACAAGTTTTCCAAGCTTCGGATATATATGCCAAGGATATGCAGAGATTTTCAGTGGCTTTTGGACAAACGCTTTAG 1299 0.4349 MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGTFCLSLILHFILYSMVVYKTLFKFNPLSLSLSMNMAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIELHAALGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENHKEKQTNQKTLVFNDQTLAHESTKPKSAQLYPPLQVSSQSNFNNSNNNSHHDLFLDRSYFSFQLFNDYATNPDSSTSLCFIPSSTSSSQVMSDLNSAVSTTMLHSILPTNANPTLSLQSDHNNPSAHIHGVHQAWEATAFNNNGGKNSGSNSDIPLQNSSDFMDNNTLTWEKDSHVNNVVPLQAEQEDIKWSEYLNNTPFFLGNQISQSIYSEVKPETGFITDEATTSWHHNSQQHPQVFQASDIYAKDMQRFSVAFGQTL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2125 432 Pfam Myb-like DNA-binding domain 104 148 IPR001005 -
Lele14g2125 432 Pfam Myb-like DNA-binding domain 14 46 IPR001005 -
Lele14g2125 432 SMART sant 13 100 IPR001005 -
Lele14g2125 432 SMART sant 103 151 IPR001005 -
Lele14g2125 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 153 IPR017930 -
Lele14g2125 432 PANTHER MYB DOMAIN PROTEIN 55 1 328 - -
Lele14g2125 432 SUPERFAMILY Homeodomain-like 84 158 IPR009057 -
Lele14g2125 432 Gene3D - 106 183 - -
Lele14g2125 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 46 IPR017930 -
Lele14g2125 432 SUPERFAMILY Homeodomain-like 8 45 IPR009057 -
Lele14g2125 432 ProSiteProfiles Myb-like domain profile. 99 149 IPR001005 -
Lele14g2125 432 CDD SANT 17 98 IPR001005 -
Lele14g2125 432 CDD SANT 106 146 IPR001005 -
Lele14g2125 432 FunFam MYB transcription factor 105 177 - -
Lele14g2125 432 Gene3D - 11 104 - -
Lele14g2125 432 MobiDBLite consensus disorder prediction 159 178 - -
Lele14g2125 432 ProSiteProfiles Myb-like domain profile. 9 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2125 Lele-ChrLele14 26772492 26773909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2125 1 432 MYB Transcription Factor Family AT1G09540 43.016 2.85e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g2125 Myb_DNA-binding 1.6e-12 CL0123