Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2108 ATGGCAATGAAGCTGATTTTGATAGTCATTGTTTTTGCTCTCTTCATTTCTGGGGTTATCTCCATTGGATCTGAGACACATTCTGCGTTTTCTCACTTAGAGAATGATTTCGTCGCCGCAAAAGCTTCCTCTTCGCCCCAACCTCTCATGGTCGCCCTCACTCTCATTCAAGGAGCTGCTTCTAAGGGAGCTGTCTGTTTGGACGGAACACTGCCTGCTTACCACTTGCACCGTGGATTCGGATCTGGGGCTAATAGCTGGCTCATTCAACTGGAGGGTGGAGGGTGGTGTAATACCATCAGGAGTTGTGTTTTTAGAAAAACTACTCGGCGTGGTTCCTCAAATCACATGGAAAAGCAAATACCATTCACGGGAATTTTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAATTACGATACTGTGATGGAGCATCATTCAGTGGGGACAGCGAGGACACGAGTGCACAACTTCAATACAGAGGGCAAAAAATATGGCTGGCTGCTATGGAGGAGTTAATGTCCAAGGGAATGCAGAATGCGAACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGCCTGGCATCCATTATACATTGTGATAAATTCCGGGGCTTGTTTCCTAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGCTTTTTCTTGACGCAATTGATGTATCTGGAGGACGCACATTGAGGAATCTATATGGAGGTGTTGTTAAATTACAGGAAGTACAAAAGAATCTGCCACAAAGTTGCCTCAACAAACTGGATCCAACTTCGTGCTTCTTTCCTCTGAATTTGATCGACCATGTTCAGACCCCTTTGTTTATACTCAATGCAGCCTATGATGCATGGCAGCTCCAAGCCAGTTTAGCACCGCCTTCAGCTGACCCCCATGGCTCTTGGAATAACTGCAAATCAAACCACGCAAACTGTAATTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTAATGCTTTGAATGGTTTCTCACAGTCATCTCAAACTGGATTATACATAAATTCTTGTTTTGCTCATTGCCAATCTGAGAGACAGGATACTTGGTTTGCTGATGACTCTCCCCTGATTAAGAACAAGCCAATTGCAATAGCTGTTGGAGACTGGTATTTTGATCGACAAGTTATCAAAGCTATTGACTGTGCATACCCCTGTGACAAGACCTGCCATAATCTGGTCTTCAATGACGATGTATCTACCCCGGTAGGCTCACAGCCAACAAGTGATGGTGTATTGTCCACAGTAGATCCCCAGCCCTCAAGTGACGATACCACTGTCACCATGGTATACTCCGGCTCTCCGAGGTTGACCTTAACCCCTCTGTTTATGCTGACTGCCTACTTCCTGGTCGATTTCATGTTCCTTTTGCAAAATGGAGACCCTCTTTTTGTCCTTGTTCGATCTTCCCTTTAA 1470 0.449 MAMKLILIVIVFALFISGVISIGSETHSAFSHLENDFVAAKASSSPQPLMVALTLIQGAASKGAVCLDGTLPAYHLHRGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSNHMEKQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSEDTSAQLQYRGQKIWLAAMEELMSKGMQNANQALLSGCSAGGLASIIHCDKFRGLFPKSTKVKCLSDAGLFLDAIDVSGGRTLRNLYGGVVKLQEVQKNLPQSCLNKLDPTSCFFPLNLIDHVQTPLFILNAAYDAWQLQASLAPPSADPHGSWNNCKSNHANCNSSQIQFLQDFRNQMLNALNGFSQSSQTGLYINSCFAHCQSERQDTWFADDSPLIKNKPIAIAVGDWYFDRQVIKAIDCAYPCDKTCHNLVFNDDVSTPVGSQPTSDGVLSTVDPQPSSDDTTVTMVYSGSPRLTLTPLFMLTAYFLVDFMFLLQNGDPLFVLVRSSL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2108 489 Pfam Pectinacetylesterase 45 393 IPR004963 GO:0016787
Lele14g2108 489 PANTHER NOTUM-RELATED 28 410 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2108 Lele-ChrLele14 26671919 26676620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2108 50 413 Carbohydrate Esterase AT1G57590 74.451 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0104 06 636936 637712 Lele14g2108 14 26671919 26676620 CCT
Lele07g0303 07 1663604 1664402 Lele14g2108 14 26671919 26676620 CCT
Lele08g0105 08 621733 622509 Lele14g2108 14 26671919 26676620 CCT
Lele05g0285 05 1601042 1603837 Lele14g2108 14 26671919 26676620 CCT
Lele14g2108 14 26671919 26676620 Lele15g0241 15 1339803 1350628 hybridization
Lele14g2108 14 26671919 26676620 Lele16g0250 16 1384956 1388476 hybridization