Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2105 ATGGGGAGGCACTCTTGCTGCTATAAGCAGAAGCTTCGCAAGGGCCTATGGTCCCCTGAGGAGGACGAAAAACTTCTTAGACATATTACAAAGTATGGCCATGGCTGTTGGAGCTCTGTTCCTAAGCAAGCCGGCCTGCAGAGGTGTGGTAAGAGCTGTAGGCTGCGGTGGATCAATTACCTGAGGCCTGATTTGAAGAGAGGAACATTCTCACAGGAAGAAGAAAACCTTATAATTGAACTTCACGCAGTACTGGGAAATAGATGGTCCCAAATTGCGGCGCAATTGCCCGGAAGAACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCTTAAAGAAGAAACTGAAGCAGAGAGGCATCGACCCTGTTACCCACAAACCACTCTCTGAGGTTCAAAATGGAGACGACAAAGACAAGGAGCCCATTGAACTGAAACTCCTCAAATCAGAAAGCCCCAATTCAGATGCCACAAAAACCTACAAACCCATCATGGAAGCTTGTCCCAGTTTCAAGTATAACCATAACACAAGTAACACCAATCTGCCAACCAACTGTAGCAGCAAAGATTTGCTTCCAGATGGGTTTACAACGAGCTACTCCACTTCAGGGCTGATGGGGAATTTCCCACTTCAGATAAATTATGCATCCACTGGCGATACCTTCTCTACTAATTCAAACCCTTCCCAATGGTTTAACCAACCAGGGAGACCAATATTCAATATCAACTCTGAATTTGCTTCCAATTCCATGTCTACTGTTCTTGAGCCTCCACCACCCACTTCATATCTAGGCGTTCCCAGCGATGATATTTGTGCAGCCTCTTACACTGAGAACGCATCCCAATCTCATTTCTGGGGATTGACAGATTCTGCAAAAGAGACCCAAATTCAGGTGCTGCAAAACCAAACAGAGGAAGCCAAGTGGGGAGATTGCGTTCAAAACCCAATCTTAATGCTGCCCGTGACTCATCTGGTATCTGATAATTTAGGGGTCATGTTGCCCCATAACGAGCAGCAAGAAGAACCCTCACAGACCTGTAACATGTTTTCCAAGGATATCCACAAGCTCACGGCTGCCTTTGGACATGTATAG 1095 0.4566 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLKQRGIDPVTHKPLSEVQNGDDKDKEPIELKLLKSESPNSDATKTYKPIMEACPSFKYNHNTSNTNLPTNCSSKDLLPDGFTTSYSTSGLMGNFPLQINYASTGDTFSTNSNPSQWFNQPGRPIFNINSEFASNSMSTVLEPPPPTSYLGVPSDDICAASYTENASQSHFWGLTDSAKETQIQVLQNQTEEAKWGDCVQNPILMLPVTHLVSDNLGVMLPHNEQQEEPSQTCNMFSKDIHKLTAAFGHV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2105 364 Gene3D - 11 67 - -
Lele14g2105 364 FunFam Myb transcription factor 11 67 - -
Lele14g2105 364 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele14g2105 364 PANTHER MYB DOMAIN PROTEIN 55 1 279 - -
Lele14g2105 364 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele14g2105 364 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele14g2105 364 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele14g2105 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele14g2105 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele14g2105 364 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele14g2105 364 CDD SANT 17 61 IPR001005 -
Lele14g2105 364 Gene3D - 69 142 - -
Lele14g2105 364 FunFam MYB transcription factor 68 140 - -
Lele14g2105 364 CDD SANT 69 109 IPR001005 -
Lele14g2105 364 SMART sant 13 63 IPR001005 -
Lele14g2105 364 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2105 Lele-ChrLele14 26663272 26664569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2105 1 144 MYB Transcription Factor Family AT4G01680 88.889 9.46e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g2105 Myb_DNA-binding 1.6e-14 CL0123