Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2102 ATGTATCGAATGGCAGAGAAGCAGACTGAGTCGATCCGCCCAGGAATCACAGGCAGATCCTCCCATCTTGCTTCCACGTGCGGCAACGATTTTGTTGAGCTGGTTTGGCAAAATGGCCAAATTCTGGTGCAAGGAGGGTCATCGAGTAGAACACTGAAGAGGCCTTCTGTCTTTGGTTATTCCATAGACCCCTCCCATGAAGCTTACGGTGAAGATCACAGCATCGCAAAACGAGCAAGGTTAAACACTTCATTCTCGCTTCTGGACTCTTCCCATCAAAATTCCCAACAAGCCAATGACCCATGTTCCTATCCGTTTGATTTGAAATGCACCGAAAGCTATAGTTTTAGTAATAAGCCTGGGGATGAATTTTCCAATTTAAGAGCAGAAGGAGAATCTAATTCCAAGCCCACAGGGGGTAATACTCATTTATGCTCAACTTCCTTACAGACCCAGAAGCATGACTTGGGATCTGATCTAAAAGTTGAAAAGATTAATTTCTCCAACTTCCTGCGACCTGCATTGCTTTTCAAATCTACTTATCAGGGAAACAGTGCAAGTCGAAACCCAAACAGTGGCGTTTCAGCTAGAGTGGAGGAGATCAAAGCAACTGATGGCGGTGGTAGCAAAGCTGTTGAACATTCCGTTGTGATTGACTCGGCTAAGGGATCACAGAGTCACAACGGAGTTCATACTGGCCAAACAGCTTTTACTTCTAATAAGGCAAACTCAACAACACCCTTTGATGGAAAAAAGGATCAGAAAACACTCCCTGATGAGCAATCCGAAGCTGTTGGATACGATAGGGCCCTCAAGAGTCAGGGATCACATGGCCAATATTATCATCAAACACACAGTAGAAAAGGAAAAACACCTGTTGAGATTTCTAGTGCACCCTTGGTAGCATCTTCTTCTTTGTGCTCGCTTGGAGCCTCGAATGACCATACTCTTCGTAGTAGGAAACACGAGGACACCGACGACTCAACCTATACAAGTGATAATGATGAAGAAACAGAAGATTCGACGACGACAAAGGAAACGCCTGCTCAAGATGGTTCAAGAGGGAAGAGAATCAGGAACACGCACATGCATAATTTATCGGAGAGGAAGCGACGAGATAAGATTAACATGAAGATGCGTGCATTAAAACAGCTAATACCTAATTGCGACAAGATGGACAACGCTTCAATGCTGGACGATGCCATCAATTATCTGAAGATCCTCAAGCTTCAGTTGCAGGTATTATCAATGGGAAGTGGGTTTTGTATGCCTCTAATGATGTCGCAGTTAGGCCTAGGCATCCCTTGCGGCTTTCCTCCTCCTCCTCCTCATTTTCTTCCACAGGTGCCTCCTCAAATGCTTCCTGGTTTCCCCAATTACGTGCTTCCCAATATTCAATTCCCAATGTCCCAACAATCTCCTTTCATTTCGACGCCTCCGAAGCCTATCCAACCCTACCTCTCTTCCCACCTAACCACTTCTGATCACGACTCTGACCTTAATGCGAAGCTGCTTTCCGCAGCTATGCCCAAACTCACTCAGGGAGGAAAGTGA 1554 0.455 MYRMAEKQTESIRPGITGRSSHLASTCGNDFVELVWQNGQILVQGGSSSRTLKRPSVFGYSIDPSHEAYGEDHSIAKRARLNTSFSLLDSSHQNSQQANDPCSYPFDLKCTESYSFSNKPGDEFSNLRAEGESNSKPTGGNTHLCSTSLQTQKHDLGSDLKVEKINFSNFLRPALLFKSTYQGNSASRNPNSGVSARVEEIKATDGGGSKAVEHSVVIDSAKGSQSHNGVHTGQTAFTSNKANSTTPFDGKKDQKTLPDEQSEAVGYDRALKSQGSHGQYYHQTHSRKGKTPVEISSAPLVASSSLCSLGASNDHTLRSRKHEDTDDSTYTSDNDEETEDSTTTKETPAQDGSRGKRIRNTHMHNLSERKRRDKINMKMRALKQLIPNCDKMDNASMLDDAINYLKILKLQLQVLSMGSGFCMPLMMSQLGLGIPCGFPPPPPHFLPQVPPQMLPGFPNYVLPNIQFPMSQQSPFISTPPKPIQPYLSSHLTTSDHDSDLNAKLLSAAMPKLTQGGK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2102 517 PANTHER TRANSCRIPTION FACTOR PIF3 2 488 IPR044273 GO:0003700|GO:0006355
Lele14g2102 517 Gene3D - 355 416 IPR036638 GO:0046983
Lele14g2102 517 SMART finulus 365 414 IPR011598 GO:0046983
Lele14g2102 517 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 359 408 IPR011598 GO:0046983
Lele14g2102 517 MobiDBLite consensus disorder prediction 221 251 - -
Lele14g2102 517 MobiDBLite consensus disorder prediction 317 368 - -
Lele14g2102 517 MobiDBLite consensus disorder prediction 221 292 - -
Lele14g2102 517 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 360 419 IPR036638 GO:0046983
Lele14g2102 517 CDD bHLH_AtPIF_like 359 421 - -
Lele14g2102 517 Pfam Helix-loop-helix DNA-binding domain 363 408 IPR011598 GO:0046983
Lele14g2102 517 MobiDBLite consensus disorder prediction 350 368 - -
Lele14g2102 517 MobiDBLite consensus disorder prediction 121 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2102 Lele-ChrLele14 26647944 26650290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2102 286 476 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46970 38.298 1.81e-29 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele14g2102 HLH 3.2e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2102 14 26647944 26650290 Lele15g0245 15 1375428 1380462 hybridization
Lele14g2102 14 26647944 26650290 Lele16g0254 16 1413261 1415670 hybridization