Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2092 ATGAGCGGGAAATTAATTGTGTCCGCGGTCTCCCTCATCCTCGTGGTGGGGGTGGTGATCGGTGCCGTCGTGGTGGTTCACAACAAGAACAGTGACCCTCAGGTCTCTGAACGTCAGAATGCGGTGAAGGCAATGTGCCAGAACACGGAGGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCAGAACAGCTCAGACCCAAAAGCTTTCTTAACCGCCGCCGTGGAAGCCTCCATCAACAGCCTCATCAAGGCCTTGAACATGAGCGATAAGCTCAGCGTTGAACAGGGCAATAGCACCCCAGGCATCGTCAAGATGGCCACCAATGACTGCAAGGAGTTGCTCGAATTCGCCATGGATAGCCTCCAGGCTTCCAAGGACTTCCTGGGTAACAACAGCGTCCAGACCTTGAACGATCGATCGCCTGACTTCAAGAATTGGCTCGCTTCTGTTGTCTCTTACCAACTGGCTTGCATGGATGGGTTCGCCGACAACGTCGACGGTGCCAAACAGATCAAGACTCAGCTTCAAGAGAATGGTTTGGACGACGTGGGGAAGCTCACCGGCATAGCCCTTGATATTATGGCTGATTTTGAAAACATCCTGGGTCAGTTTGGTTTGAAGGTGAAAGTGAACTCTGGTTCTCGTCGTCTTCTTCAGGTGGACAGCGCAGGCTATCCCACTTGGCTCCCTGCAGCTGATCGGAAGCTCTTGGCCAACGTAAGGCCGAGGGGAAGGGGACATCATATAAAGCCCAACGTAGTGGTGGCCCAGGATGGAAGTGGCCAGTTCAAGACCATCATGGACGCCGTTAACTCTTACCCTAGGGGTTTCCAAGGAAGATACATCATCCAAGTCAAGGCCGGTACATACCGTGAGTACGTCACAATTCCCAAGACGGCCGTCAATATCCTTATGTACGGTGATGGCACTGATAAAACCGTCGTCACCGGTAGCAGAAACAATGTTGATGGGTACACCACAAAGGACACAGCTACTTTCGTAAATCTTGGGAACGGGTTCATCGCCAAGTACATGACATTTGTGAACACTGCTGGTCCTGAAAAGCACCAAGCAGTGGCGTTTAGGAACCAGGGAGATATGTCGGCTGCATTCGATTGCTCTTTTGTGGGTTACCAGGACACGTTGTACGCTCAAACCAATCGTCAATTCTACAGGAATTGCGACATCTCCGGCACCGTTGACTTCATATTTGGCGTGTCCACCGTGTTGATCCAGAGCTCTCGAATCATCGTGAGGAAGCCAATGGACAACCAATTCAACACAGTGACGGCAGACGGCAGAAACATGCCGAACATGCCCACAGGAACAGTGATCCAGAACTGTGACATTGTTCCAGAGAATGCTCTCTACCCCGTGAGGTTTCAGATCAGATCGTACCTGGGAAGACCATGGAAGCAGTATGCTAGAACTGTGGTGATGGAATCCAGAATAGCTGACTTCATTCAACCCGATGGGTGGACTCCATGGGAAGGAAGCTTTTTCCAGAAAACTTTGTACTATGCAGAGTACAACAACGAAGGACCTGGAGCTAATCTGTCCAAGAGGGTTAAGTGGCCGGGTTACAAAGGCCTCATCAGTAAGAATGAAGCCGCCCAGTTCACCGCCGGCCAATTCGTCAAAGGCGGGTCCACTTCCCGATCTGAGGACTGGATGAAGCCCCTTCATGTTCCTTTCGACATTGGCTTCACCAAGCCTTGA 1725 0.5142 MSGKLIVSAVSLILVVGVVIGAVVVVHNKNSDPQVSERQNAVKAMCQNTEDQKLCHDTLGNVQNSSDPKAFLTAAVEASINSLIKALNMSDKLSVEQGNSTPGIVKMATNDCKELLEFAMDSLQASKDFLGNNSVQTLNDRSPDFKNWLASVVSYQLACMDGFADNVDGAKQIKTQLQENGLDDVGKLTGIALDIMADFENILGQFGLKVKVNSGSRRLLQVDSAGYPTWLPAADRKLLANVRPRGRGHHIKPNVVVAQDGSGQFKTIMDAVNSYPRGFQGRYIIQVKAGTYREYVTIPKTAVNILMYGDGTDKTVVTGSRNNVDGYTTKDTATFVNLGNGFIAKYMTFVNTAGPEKHQAVAFRNQGDMSAAFDCSFVGYQDTLYAQTNRQFYRNCDISGTVDFIFGVSTVLIQSSRIIVRKPMDNQFNTVTADGRNMPNMPTGTVIQNCDIVPENALYPVRFQIRSYLGRPWKQYARTVVMESRIADFIQPDGWTPWEGSFFQKTLYYAEYNNEGPGANLSKRVKWPGYKGLISKNEAAQFTAGQFVKGGSTSRSEDWMKPLHVPFDIGFTKP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2092 574 Gene3D - 248 571 IPR012334 -
Lele14g2092 574 PANTHER PECTINESTERASE 16 561 - -
Lele14g2092 574 FunFam Pectinesterase 248 571 - -
Lele14g2092 574 Pfam Plant invertase/pectin methylesterase inhibitor 41 195 IPR006501 GO:0004857
Lele14g2092 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 197 IPR035513 -
Lele14g2092 574 CDD PMEI-like_3 44 197 - -
Lele14g2092 574 SUPERFAMILY Pectin lyase-like 250 567 IPR011050 -
Lele14g2092 574 SMART PMEI_2 37 195 IPR006501 GO:0004857
Lele14g2092 574 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Lele14g2092 574 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Lele14g2092 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 167 IPR006501 GO:0004857
Lele14g2092 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 199 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2092 Lele-ChrLele14 26583391 26585210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2092 5 571 Carbohydrate Esterase AT3G05610 38.879 1.63e-136 410