Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2082 ATGCCAGGAGATAAAACCCAACAAGGCTCTATGGATTATACCAGTATTACTGACATCAAAACGGATCCAACCGATGATATTGGAGGGCGTGCCATTGATCTTACGTCTCCTTGTGCGCACCATTTGCAAGGTTCTCTTCATGGTTTCCAAATCTATTGTCTGTATCTTTCCCAATTTATAGTAGCCTTCGAAGGAAACTGCAAGCCAAATTTTGTTCACCAAGTTCTTACTAAGCACGGAGCTACGCAGGCTCACATTCGCTCCCAGTCCAAGTCGCACACTAACATGAGTCGTTTCGTGGCTCTAGCTAGTTCTGAGCTTTCTCATTTCCTTGTTTTCGGCTCAGCAGGTTTTTCCATGCTAAACGTTGATTCACTCCGCAAACTTGAAAGTCAAGTTTGCGGCCAAGTCCTTAGGCTGCTCCATACAGGGGATGATGTAACACATGCTTCTAAGTTAACAGATGTAAACGCAAATGCAAATGGCATTGATAGGTTGCCTGCCGAGATGAATGGCATGAAAATTAGGGACGACAAGGAAATGGAAGCAACTGTTATAGATGGAAACGGGACTGAAACCGGACATATAATTGTCACCACCATTGTCTGTAAAAATGGCCAGCCAAAGCAGACAATAAGCTACATGGCTGAGCATGTTATTGGGCGTGGATCTTTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAGACGGGTGAAACTGTGGCTATAAAAAAGGTTCTTCAAGACAAGAGGTACAAGAACCGAGAACTGCAAACCATGCGTCTTCTTGACCACCCTAACGTTGTATCTTTGAGGCATTGTTTCTTTTCAACAACTGAAAAAGAGGAGCTTTACCTGAACTTGGTATTAGAGTATGTTCCTGAGACTCTCCATCGGGTCATCAGACACTATAACAAAATGAATCAAAGGATGCCGTTGATATATGTCAAACTTTATTTTTACCAGATATGTAGAGCACTTGCTTACATTCACAACAGTATTGGAGTGTGTCACAGGGACATAAAACCTCAAAATCTACTGTTTGTCAATGTTTCATCTATGGAGACATATTTGGACGTAGAGATCGATGTGGTAAAAGGGGAACCGAACATATCATATATCTGTTCTAGGTACTATAGAGCGCCTGAGCTCATCTTTGGTGCTACTGAGTACACCACAGCCATTGACATCTGGTCTGCTGGTTGCGTACTTGGTGAACTATTGCTCGGTCAGCCTCTCTTTCCTGGCGAGAGTGGAGTAGACCAGCTTGTTGAAATTATCAAGGTTTTAGGTACTCCAACAAGGGAAGAAATCAAGTGCATGAATCCTAATTACACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCTTGGCACAAGATCTTTCACAAACGCATGCCATCTGATGCTGTGGATCTTGTCTCAAGACTACTGCAGTACTCTCCCAATCTTCGAAGCACAGCTTTGGAGGCTCTTGTTCACCCGTTCTTTGATGAGCTGCGTGATCCAAACACTCGGTTGCCAAACGGGAGTTTCCTCCCGCCACTCTTCAACTTCAAGGCAAATGAGCTCAAGGGAGTGCCTGCTGAGATGCTGGTGAAGCTTATTCCATCACATGCAAGAAGGCAGTGTGCATTGTTTCGGGCGTGA 1647 0.4402 MPGDKTQQGSMDYTSITDIKTDPTDDIGGRAIDLTSPCAHHLQGSLHGFQIYCLYLSQFIVAFEGNCKPNFVHQVLTKHGATQAHIRSQSKSHTNMSRFVALASSELSHFLVFGSAGFSMLNVDSLRKLESQVCGQVLRLLHTGDDVTHASKLTDVNANANGIDRLPAEMNGMKIRDDKEMEATVIDGNGTETGHIIVTTIVCKNGQPKQTISYMAEHVIGRGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLRHCFFSTTEKEELYLNLVLEYVPETLHRVIRHYNKMNQRMPLIYVKLYFYQICRALAYIHNSIGVCHRDIKPQNLLFVNVSSMETYLDVEIDVVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPSDAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGSFLPPLFNFKANELKGVPAEMLVKLIPSHARRQCALFRA 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2082 548 SUPERFAMILY Protein kinase-like (PK-like) 213 520 IPR011009 -
Lele14g2082 548 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 178 542 - -
Lele14g2082 548 Pfam Protein kinase domain 215 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2082 548 ProSiteProfiles Protein kinase domain profile. 214 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2082 548 ProSitePatterns Protein kinases ATP-binding region signature. 220 244 IPR017441 GO:0005524
Lele14g2082 548 MobiDBLite consensus disorder prediction 1 21 - -
Lele14g2082 548 Gene3D Transferase(Phosphotransferase) domain 1 294 540 - -
Lele14g2082 548 SMART serkin_6 214 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2082 548 FunFam Shaggy-related protein kinase kappa 294 540 - -
Lele14g2082 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Lele14g2082 548 MobiDBLite consensus disorder prediction 1 22 - -
Lele14g2082 548 FunFam Glycogen synthase kinase-3 beta 198 293 - -
Lele14g2082 548 CDD STKc_GSK3 209 499 IPR039192 -
Lele14g2082 548 Gene3D Phosphorylase Kinase; domain 1 199 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2082 Lele-ChrLele14 26537216 26544058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2082 220 503 MAP Kinase Gene Family AT4G01370 35.593 4.87e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele14g2082 Pkinase 1.3e-53 CL0016