Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2076 ATGAAGGTGGAAGGCGAGAGTAAGAGGAAGACACACGAGAGTGAGGATGAGATGGGCTTAAGGAAGGGTCCATGGACTGTGGAAGAGGACACCATTCTGGTCAATTACATCGCCGTCCACGGCGAAGGTCGCTGGAATTCCGTCGCCCGCTGTTTGAAGAGAACGGGCAAAAGTTGCAGGTTGAGATGGCTGAACTACTTGCGTCCCGACGTTCGGCGGGGGAATATCACGCTGCAGGAACAGATAGTAATTCTTGATCTGCACTCTCGGTGGGGAAATAGGTGGTCGAAGATAGCGCAGCACTTGCCAGGAAGAACAGACAATGAGATTAAGAATTATTGGAGGACGAGAGTGATGAAGCAGGCGAAGCAGCTCAAGTGTGATGTCAACAGCAAGTTGTTCAGGGACACCATGCGTTACGTGTGGATGCCCCGCCTGCTGGAGCGGATACGGGCGGCCGCTTCCGAATACGACCCGAACTGCCAACCCATCCCCGTCAACCCGAATCACCCCTCCGTCGCGCCTCTCGATATGCAGTTCCACCAAGCCCCTGCTCCCCCGTGGCAGGCTCATGATGTTTCGGACGGTTCCCCGAACGGGTCGGAAGTTGGGCCAGGGGTTGTATCGGAGCAGGGGAATAATGCCCTGGGTGGCGGTGGCGGTGGCGGTGGTGGGGAGTGGGCCGAAACATTGTGGAGCGACGACAATATTTGGTTTTTGCAGCAACAACTTTTCGAAGATATGTGA 747 0.5556 MKVEGESKRKTHESEDEMGLRKGPWTVEEDTILVNYIAVHGEGRWNSVARCLKRTGKSCRLRWLNYLRPDVRRGNITLQEQIVILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVMKQAKQLKCDVNSKLFRDTMRYVWMPRLLERIRAAASEYDPNCQPIPVNPNHPSVAPLDMQFHQAPAPPWQAHDVSDGSPNGSEVGPGVVSEQGNNALGGGGGGGGGEWAETLWSDDNIWFLQQQLFEDM 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2076 248 CDD SANT 24 67 IPR001005 -
Lele14g2076 248 Gene3D - 77 118 - -
Lele14g2076 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Lele14g2076 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 71 IPR017930 -
Lele14g2076 248 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Lele14g2076 248 SUPERFAMILY Homeodomain-like 19 114 IPR009057 -
Lele14g2076 248 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Lele14g2076 248 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Lele14g2076 248 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 158 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele14g2076 248 FunFam MYB transcription factor 77 140 - -
Lele14g2076 248 CDD SANT 77 116 IPR001005 -
Lele14g2076 248 MobiDBLite consensus disorder prediction 185 225 - -
Lele14g2076 248 SMART sant 21 69 IPR001005 -
Lele14g2076 248 SMART sant 72 120 IPR001005 -
Lele14g2076 248 MobiDBLite consensus disorder prediction 1 21 - -
Lele14g2076 248 Gene3D - 19 73 - -
Lele14g2076 248 FunFam Myb transcription factor 22 72 - -
Lele14g2076 248 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2076 Lele-ChrLele14 26500471 26501442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2076 7 247 MYB Transcription Factor Family AT2G47190 53.435 1.73e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g2076 Myb_DNA-binding 2.1e-15 CL0123