Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2063 ATGCGTGTCAAGACGGAGGAAGCAGTTGGATCCACTTCGTTTGGGGATTATAATTCAAACAGTTTCCCACTTTCGAGTGTCTTTGATTTTCATGAAGTGGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGCGTGCAGGAGCGTGACTATGGTTCCATGCTGGATTTGACCCAGCAACTATTCCCTTCTGACCTCAAAAATCATTGTGCCGCTGCAAAAACCTACTGCGAGCCGTTGAATAAACAGCCCGCCACTCCAAACTCCTCATCCACTTCATCTGCGTCCAGTGAGGCAGCCATTGATGAACAGACTAAAACTGTAGATCAACGAGGACATGAACCGCCAAAGACCAAGAACCAGTTGAAGGCGAAGAAGACAAATAAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGATGATGGGTACAGGTGGAGAAAGTACGGTCAAAAAGCTGTAAAGAACAGCCCCTTTCCCAGGTGA 510 0.4706 MRVKTEEAVGSTSFGDYNSNSFPLSSVFDFHEVEKSSLGFMELLGVQERDYGSMLDLTQQLFPSDLKNHCAAAKTYCEPLNKQPATPNSSSTSSASSEAAIDEQTKTVDQRGHEPPKTKNQLKAKKTNKKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2063 169 Gene3D WRKY domain 135 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele14g2063 169 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 82 169 IPR044810 GO:0003700
Lele14g2063 169 MobiDBLite consensus disorder prediction 104 121 - -
Lele14g2063 169 MobiDBLite consensus disorder prediction 80 142 - -
Lele14g2063 169 MobiDBLite consensus disorder prediction 81 103 - -
Lele14g2063 169 Pfam WRKY DNA -binding domain 149 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele14g2063 169 ProSiteProfiles WRKY domain profile. 143 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele14g2063 169 MobiDBLite consensus disorder prediction 150 169 - -
Lele14g2063 169 SUPERFAMILY WRKY DNA-binding domain 140 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2063 Lele-ChrLele14 26443756 26444537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2063 14 169 WRKY Transcription Factor Family AT2G47260 45.685 8.46e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele14g2063 WRKY 2.2e-07 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0151 06 931350 934082 Lele14g2063 14 26443756 26444537 CCT
Lele14g2063 14 26443756 26444537 Lele15g0276 15 1557614 1558926 hybridization
Lele14g2063 14 26443756 26444537 Lele16g0290 16 1614186 1617119 hybridization