Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2054 ATGTCGGTCCTCCCAGTTTCTATCTCAATCGGTGCCTTAAAAGTCATTTACCCTCTGTTGCTGAAATGGTTGCTTGTATTATCTTGCTCAGTATTAATGGCTGACTCTAAAGCATTATCTCCGGCTAGATCGCCTTCTACTACTATGGTTGTTTGTGATCTGCCACTACCAGCAAATCTCCATGGGCAAAAGCATCTATCATCCCATGGTGGACCAATTCTAACACCATCACCTACCCATCCTCCTTTATATAGTCCACCATCCTTGAGCACAGGTCACCCCCCCGCAAGTTCACATTCATCCAATCCATTCATGAAGGGCGGTGAATTAGGACCTCAAGTTTCTGGTTTAGGAGATATTTCCCCTATTTATTCAACAGCTTTTGCGATTCCTTCTGGTTTGGCTCAGCCACCCTTATCCCCTTATGTTTCCAATTGTTGTAAACAAAACATGGTGTTGAAGCGTGGGAGCAAGAGTTGTCGCTGTGTATATCCCATAAAACTAGACCTTCTACTTTTGAATGTCTCTCAAAACTCTAATTGGAATCTTTTTCTCGACGAATTAGCTACCCAACTTGGAATGCAAATTTCCCAGATTGAATTGGTAAATTTTTATGTACTCACCCTATCAGCGTTAAATATATCAATGGATATCACTCCACATAAAGGGGCCAGTTTCTCTGCCGAAGAAGCATCTATAATAAACTCTTCGCTTTCAATGCATAAGATTCAACTAGATCCTAGATTGGTGGGTGACTACAAACTTCTCAATTTGACGTGGTATGAGCCTCCACCTCCATCTCAAGCTCCGACGGCTGTTGCATCACCCATGAAAGCTCCTATTTACCACAAACCAGCAACTTCAACACCAAATGCTTCAAATAGGAGAGGACATTCAAATTTGTATGCTATTCTTGGAATTGGTGCTGGCATACTCTTCATTGCCATTATATCTGTACTCGTACTTTGTTTATGCACATTGAGGCCTAAGACCAAAGGACCATCAATAGATACTGAGAAGCCAAGGACAGAAGGTGCAGTTTCAGCTGCAGGGTCTTTTCCTCATCCGACCAGCACAAGATTTATTGCTTATGAAGAACTTAAAGAAGCGACAAACAACTTTGAAACAGCAAGCTTACTTGGAGAAGGCGGGTTCGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACGGCTGTAGCTATTAAGAGGCTTACTAATGGAGGGCAACAAGGGGATAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAATCTTGTAAAATTGGTGGGATACTATAGCAATCGTGACTCATCGCAAAATCTATTATGCTATGAGCTTGTTCCAAATGGAAGTTTGGAGGCGTGGCTTCATGGTCCCTTAGGAATAAATTGTCCTTTGGATTGGGATACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACTTACATGAAGACTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCGTCCAACATATTGCTGGAAAACAACTTCCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACAGGTCACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTTGATATGTCACAGCCAGCTGGACAAGAGAACCTGGTTACTTGGGCAAGGCCAATCCTAAGAGATAAAGACCGGTTGGAAGAACTTGCTGATCCAAGGCTGGGGGGGAAATATCCGAAGGAAGATTTTGTCCGGGTTTGTACTATTGCTGCAGCCTGCGTCGCTCCTGAAGCAAGCCAACGACCCACAATGGGGGAAGTCGTACAGTCACTTAAAATGGTGCAGCGCATGACCGAACATCAGTATTCCATGGTGGCCCCGTCCAATACAAGGACCAACCTAAGACAGTCCTCTACCACTTTCGAGTCCGATGGGACATCTTCTATGTTCTCTTCAGGTCCCTACTCTGGTCTAAGCGTCTTTGACAATGACAACGTTTCTAGGACGGCAGTTTTCTCTGAAGATCTTCATGAAGGAAGATGA 2157 0.4381 MSVLPVSISIGALKVIYPLLLKWLLVLSCSVLMADSKALSPARSPSTTMVVCDLPLPANLHGQKHLSSHGGPILTPSPTHPPLYSPPSLSTGHPPASSHSSNPFMKGGELGPQVSGLGDISPIYSTAFAIPSGLAQPPLSPYVSNCCKQNMVLKRGSKSCRCVYPIKLDLLLLNVSQNSNWNLFLDELATQLGMQISQIELVNFYVLTLSALNISMDITPHKGASFSAEEASIINSSLSMHKIQLDPRLVGDYKLLNLTWYEPPPPSQAPTAVASPMKAPIYHKPATSTPNASNRRGHSNLYAILGIGAGILFIAIISVLVLCLCTLRPKTKGPSIDTEKPRTEGAVSAAGSFPHPTSTRFIAYEELKEATNNFETASLLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMTEHQYSMVAPSNTRTNLRQSSTTFESDGTSSMFSSGPYSGLSVFDNDNVSRTAVFSEDLHEGR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2054 718 Gene3D Phosphorylase Kinase; domain 1 356 451 - -
Lele14g2054 718 ProSiteProfiles Protein kinase domain profile. 374 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2054 718 MobiDBLite consensus disorder prediction 75 89 - -
Lele14g2054 718 CDD STKc_IRAK 380 650 - -
Lele14g2054 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Lele14g2054 718 FunFam Receptor-like serine/threonine-protein kinase ALE2 452 667 - -
Lele14g2054 718 SUPERFAMILY Protein kinase-like (PK-like) 352 651 IPR011009 -
Lele14g2054 718 MobiDBLite consensus disorder prediction 63 105 - -
Lele14g2054 718 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Lele14g2054 718 Pfam Protein kinase domain 375 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g2054 718 FunFam Receptor-like serine/threonine-protein kinase ALE2 354 451 - -
Lele14g2054 718 Gene3D Transferase(Phosphotransferase) domain 1 452 674 - -
Lele14g2054 718 PANTHER OS01G0750732 PROTEIN 144 676 - -
Lele14g2054 718 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2054 Lele-ChrLele14 26396476 26401957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2054 1 718 Receptor kinase-like Gene Family AT4G02010 67.490 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele14g2054 Pkinase 1.4e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0354 07 1977083 1977733 Lele14g2054 14 26396476 26401957 CCT
Lele08g0158 08 978361 978996 Lele14g2054 14 26396476 26401957 CCT
Lele14g2054 14 26396476 26401957 Lele05g0343 05 1945669 1952940 CCT
Lele14g2054 14 26396476 26401957 Lele06g0162 06 976751 984770 CCT
Lele14g2054 14 26396476 26401957 Lele07g0361 07 2003319 2010565 CCT
Lele14g2054 14 26396476 26401957 Lele08g0165 08 1007828 1015368 CCT
Lele14g2054 14 26396476 26401957 Lele15g0282 15 1599773 1605223 hybridization