Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2050 ATGGGCCCGGCCCGTAAAACTTTGCCTCATATGAAGGCACTGCACGCTACTATGGATAGTACTGCCTCTCCTAAACTTGAGTCAGAAGCATCTCCAGCTCCCACACCAGAAATTCAAGAATCCAAGAAAAGGAAAATGGTTCAGAAAACAGTTGTGACGGTGAAAGTTGGAGAAAATGTTAGTAAAGTGAAGAATGAAGGGCTGCCATCGGACTCATGGTCTTGGAGGAAATACGGACAAAAGCCTATTAAAGGATCTCCTTATCCAAGAGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAGAGGTGCAGAACAGATGCTTCAATGCTTATTGTCACCTACACTTCTTCCCATAACCATCCAGCTCCAGAATTCAAAGAATCAAAACCTCAAGCTACTGAGGATCTCTCACTTGATACTTCAAAGGTGAAAGACCAAGACCAAGAGGAACAGAAGAAAGATCTTCAACTTGCAACAGCTAGCGATCGAGGTGCAAATGAAGAAAATTTTCATTACCTGCAATCGCCGATAGGCTGTTCTGAAGACATTGTTATTGCACAAGAGGATCTTTTCAAATTGAACCCAGAGAAAACGCAAGAGAGGATAGATCTTCTCTTGGAGGAAGAGCCGCTCTGTTATTCTCAGCTCAAGGGCCCCTCAACGCTCAAATCGGAGGAACTTGACTTCTTCGACGAGCTTGAAGAGCTACCCATGTCTCCGTCGTTGTTGAACTTGATGAGGAACAATTTTCCCGATGAAAGGATTCCAGTTGCCCCGTCATGA 804 0.4453 MGPARKTLPHMKALHATMDSTASPKLESEASPAPTPEIQESKKRKMVQKTVVTVKVGENVSKVKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIVTYTSSHNHPAPEFKESKPQATEDLSLDTSKVKDQDQEEQKKDLQLATASDRGANEENFHYLQSPIGCSEDIVIAQEDLFKLNPEKTQERIDLLLEEEPLCYSQLKGPSTLKSEELDFFDELEELPMSPSLLNLMRNNFPDERIPVAPS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2050 267 MobiDBLite consensus disorder prediction 129 164 - -
Lele14g2050 267 ProSiteProfiles WRKY domain profile. 64 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele14g2050 267 Gene3D WRKY domain 53 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele14g2050 267 SUPERFAMILY WRKY DNA-binding domain 65 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele14g2050 267 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele14g2050 267 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 248 IPR044810 GO:0003700
Lele14g2050 267 MobiDBLite consensus disorder prediction 122 174 - -
Lele14g2050 267 MobiDBLite consensus disorder prediction 1 47 - -
Lele14g2050 267 FunFam WRKY transcription factor 65 51 130 - -
Lele14g2050 267 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2050 Lele-ChrLele14 26382301 26384108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2050 41 249 WRKY Transcription Factor Family AT4G01250 41.905 2.20e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele14g2050 WRKY 2.3e-24 CL0274