Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2048 ATGCGGCATAAAACGGTCCCAGAAATTACGTTGAGTTCCGCGGTAGGCCATCTCACTTCTCACTACCTACAGCAAACGTGTCAGTCTTCAAAGCTGGCAAATGATGCTGTTGGAACCTTGTCATGCAAGATTGATCAGCTGGAAAAGCAAATCCAGGCGGAGAGATTTGAATCAATTGAAGAAAAACTGTTGAGGAATGGGAAGAAGGTACAGTGTCATGTTTCCCAGGTTGTCTCAGCAATGTCAAAAAGGGATTCTTTACATATACAGGAAAATAGGATTAATCAAATGCTTTCTTCAAGAATTGAACACCCTCTATTTAAGTTCGATGCTATATCTCAAGGTTCTGGTGACAAAGATCTCATCAACGGCCTAGATAACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTTGTCGGCAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCGTTAATATGCAGTGACAGTGAGGAAGAGCTAACAGAACCGGAGGAAGATAAACATGAATTTACTGACGCTGAAGATCGAATTTTATGGATGGCATTTGAGGAATATGGGTTAACTGAGGAAGTATTGGATACTGTGAGTGAGTCTGTTGGCGGTACTAGACAGGAAATTCAGAATAGGTACAAAAATCTCAAGGAAAAGAACACGGGGAGGCAGGACCAGCAGTCTGAAGGTTCTGGAGATTATGAATCTCGGATTGGCATAAGTTTGGAGGAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGATGCATGAGTGAAAAGCAGCCAGTTTGGCTTGAACATGAAGAGGACAAGAAGCCATGCAGTGATCAGTGTTACCTAAGGTTAAAGGCTGAGAAAACTTCATCAGATCCCAGGTGTCTGCAGGGAGATAGCCTCACTATGGAGGAGGGAGTATTGACTTTGGCACCCTCTGTTGCAGCAGAGCCAGGAAATCAGAGTGCTGCAACTACCTTGGAGGATGAAAGATGCAATTCTACGAACACAACACCTTTTCCAACAGAAGTTGCTGGTTGTAAAGATCTCAACTTAAATGTGCCTGTTGCAGAGAGTCTGGGGAAACGGAAGACCATAAATCATTCAGATATAGCACTGTCTGACTTAACATTGCTTCCTGATGATTCGGAGAGTTCTTGTAAAAAGCAAAAGAAAATCACAGATAATGATGTAGTCACTGCAATTAATGATTTTAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTGTTATTGCTTCTGAATGTTTAAATGATTCTGTAGAGCATAGTTCTAACAAATCAATTCCTTCTGGGAGCACTTGTCATGGTGAACATGGAAATGTTGGGGATGGATCTAAAGAAGGCATGGCTGAGGCAGAATTCAATGAGGCATCTAATTTCATGAATGAGCATGTTGAAGGGATGCAGAGTCTTTCAGAATGGAAACCTCTGGAGAAAGAGCTATTCTTAAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAATTTACTTTCTGGCCTAAAGACCTGCATGGAAGTAGCTACTTACATGCATGCTGGTGGAGCGTCAGTGCCCTGCAGATCTAATGTTCCCCCGAATTCACTCAGGAATGACAATGGAAAAACTGATGCAGAATGCACAAGATGCCAACAAGAGCAAGATTGCTGCGGAAAAGAGGCAAAACAAGGAAATTTAAATATTCTTGGAAATCAGCTGGCCACCCATCAATATGGAAAAGAATTGCAGATGGAAAAAACCAATCTTGCAAGCAATATACACCCTGTGGATGTCAATCGATGTGTGGAAAGCAGTGTCCATGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGATGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGCCACTGTGCTAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGCGAATGTGACCCAGATGTTTGTCGAAACTGCTGGGTTAGGTAACACCTTTAATAATTTTTGTGGCGACAGTTCATTAGGAGAGCCACCTAGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTGTTGGCAAAGTCTGATGTCGCAGGATGGGGAGCATTCTTAAAGAACCCAGTTAACAAAAATGATTACCTAGGAGAATACACTGGGGAACTGATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCCAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCGAACCACTCGTCAAATCCAAACTGTTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTAGGGATATTTGCGAAGGAACACATTGAAGCAAGCGAGGAGCTGTTCTACGATTATCGTTATGGTCCAGATCAAGCACCCGCGTGGGCCCGCAAACCTGAGTCTTCCAAGAGAGACGAATCGGCGGCTTCTCAAGGAAGGGCCAAGAAACACCAGTCTCATTGA 2568 0.4287 MRHKTVPEITLSSAVGHLTSHYLQQTCQSSKLANDAVGTLSCKIDQLEKQIQAERFESIEEKLLRNGKKVQCHVSQVVSAMSKRDSLHIQENRINQMLSSRIEHPLFKFDAISQGSGDKDLINGLDNRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTDAEDRILWMAFEEYGLTEEVLDTVSESVGGTRQEIQNRYKNLKEKNTGRQDQQSEGSGDYESRIGISLEESLSTALDSFDNLFCRRCMSEKQPVWLEHEEDKKPCSDQCYLRLKAEKTSSDPRCLQGDSLTMEEGVLTLAPSVAAEPGNQSAATTLEDERCNSTNTTPFPTEVAGCKDLNLNVPVAESLGKRKTINHSDIALSDLTLLPDDSESSCKKQKKITDNDVVTAINDFNRDLNVSACDEKCVIASECLNDSVEHSSNKSIPSGSTCHGEHGNVGDGSKEGMAEAEFNEASNFMNEHVEGMQSLSEWKPLEKELFLKGVEMFGRNSCLITRNLLSGLKTCMEVATYMHAGGASVPCRSNVPPNSLRNDNGKTDAECTRCQQEQDCCGKEAKQGNLNILGNQLATHQYGKELQMEKTNLASNIHPVDVNRCVESSVHAFIMELAVKNIVDAPKAAKIDSEVATVLRVNAEVDNAHALLLDANVTQMFVETAGLGNTFNNFCGDSSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSKRDESAASQGRAKKHQSH 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2048 855 MobiDBLite consensus disorder prediction 832 848 - -
Lele14g2048 855 CDD SANT 172 217 IPR001005 -
Lele14g2048 855 Gene3D SET domain 659 823 IPR046341 -
Lele14g2048 855 CDD SET_EZH 706 822 - -
Lele14g2048 855 SMART sant 482 532 IPR001005 -
Lele14g2048 855 SMART sant 169 219 IPR001005 -
Lele14g2048 855 SMART set_7 706 827 IPR001214 GO:0005515
Lele14g2048 855 Coils Coil 206 226 - -
Lele14g2048 855 MobiDBLite consensus disorder prediction 213 235 - -
Lele14g2048 855 MobiDBLite consensus disorder prediction 828 855 - -
Lele14g2048 855 ProSiteProfiles SET domain profile. 706 821 IPR001214 GO:0005515
Lele14g2048 855 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 687 854 IPR045318 GO:0006338|GO:0018024
Lele14g2048 855 SUPERFAMILY SET domain 692 824 IPR046341 -
Lele14g2048 855 Pfam SET domain 717 820 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2048 Lele-ChrLele14 26368387 26374678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2048 676 824 C2H2 Transcription Factor Family AT2G23740 26.506 1.68e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele14g2048 SET 2.8e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2048 14 26368387 26374678 Lele15g0288 15 1627554 1633631 hybridization
Lele14g2048 14 26368387 26374678 Lele16g0301 16 1666992 1678123 hybridization