Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2041 ATGTTGTCCGGTTGTATAGCTCCTTGTGCTTGTTCTGGGACGGTTAAGCAATATCAACCTGGTTACACGGCTCCTCCTCCAAAGAAATTGCAGATAAATGGTGAAGCAATGACCATTCGAGATAGCCTGCAAATTTCAAGAATGGAGGAAGAACCGCTGAATGCTAGATTAGAGGCAATAGTTGAAAGAGAGGCAATAGAAAGTGATTACTATGAATGCACGTCTGCCGCAGATAGAAGTGCATCTTACTGCCGATTCCTGGCCTTGGCATTTACACTCTTTATGCTTGTGAGACATCTTCTCGCTGTGCTTACGAGTGGAACAGAAGATTACCCATTCACACTTCTGACTATTTTAATGCTAAGGGCTGGCGGAATTTTACTACCCATGTTCATAATTATTAGAATGACTGGATCTATTCGAAACATAATTCAGCGTCACGATCAGGATTCTGAAGGCGCAGCAATATCCGATGGATGCGACAACGAAAACAGGCCACTGCGTGATGTGATTTTTAGACACGCATAG 528 0.4337 MLSGCIAPCACSGTVKQYQPGYTAPPPKKLQINGEAMTIRDSLQISRMEEEPLNARLEAIVEREAIESDYYECTSAADRSASYCRFLALAFTLFMLVRHLLAVLTSGTEDYPFTLLTILMLRAGGILLPMFIIIRMTGSIRNIIQRHDQDSEGAAISDGCDNENRPLRDVIFRHA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2041 175 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 16 147 IPR033275 -
Lele14g2041 175 Pfam Protein of unknown function (DUF3675) 20 136 IPR022143 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2041 Lele-ChrLele14 26329234 26331621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0347 05 1984574 1990111 Lele14g2041 14 26329234 26331621 CCT
Lele14g2041 14 26329234 26331621 Lele15g0296 15 1680996 1683055 hybridization
Lele14g2041 14 26329234 26331621 Lele16g0308 16 1717791 1721834 hybridization