Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2039 ATGCTCGAGCACCCTCAACAGCTGGTGGTCGACTTCCATTCTGCCGTCAACCAGAGAAGGCCAACTCCGTTACCCGCCGATCAAAATCTTCAAACCAACAACATTTATCTGATGCTCCCCATGAGGCGAGGGAAACCCCTCGGATTAAACGCTCAGGACAGTCGTCGTTTTCTTCTGATTCTCAACTCCAAGTCCCTCCTTCCCCGTTCTACCCGCAGATTCCTTCCTTGGCTTGCTCGCATGTGCCACCATCCCAATGCAGTAGAAGCAGGTCATCATCTCAGACCAAAAAAGCCACAAATATCGGAGAACGAGGAGACGGCCGAGATGTGCAGGGACGTCTTCCCTGAGAATATTGAAAGACCTGAATATTTGAGTCGTCAAACCCAAAAGAGAACATGCAGGGAGCTTTCTGTATTGTATTTTAAGTGCAGAATTGTATTGTGGTCCCTGCATCAGCTGCCTCTCAACCCAGTCATTCATCAATTTCTCAAGGCATTTCCAAATCCCATAATGGCTTCCTTCTCATGCATCCTCAGTATCAGTTTGATGCTTCTGGCGGTTATGGGCGGAGAAGGACGTGATCCATTTGCATGTGACCCCAAAGTGGCTAACACGAGTACGCTGCCGTTTTGCCTAACATCGCTGTCGACAACTGCGAGAGTGAAGGACCTGATCGGAAGGTTGACGCTCCCAGAGAAAGTAAAGCTGCTGGTGAACAATGCGGCGGGCCTTCCACGGCTCGGGATTAAAGGGTACGAGTGGTGGTCCGAAGCACTGCATGGCGTTGCCAATGTGGGTCCCGGCACCAAGTTTGCCGGGCCATTCCCTGGCGCCACCAGCTTCCCTCAAGTCATCACCACCGCTGCTTCCTTCAATGCATCCCTGTGGGAGGCTATCGGACGGGTAGTGTCAGACGAAGCAAGAGCAATGTATAACGGAGGAACGGCGGGGTTGACGTACTGGAGCCCAAACGTGAACATATTCCGGGATCCCAGGTGGGGACGTGGACAGGAAACTCCCGGTGAAGATCCCTTCGTGGCAGGTAGATATGCGGCCCATTACGTGAGGGGGTTACAGGGAACGGATGCCAACCGGTTGAAGGTTGCCGCTTGTTGCAAGCATTTTACGGCTTACGATCTTGATAATTGGAATGGCATGGATCGCTTCCACTTCAATGCTCAAGTTAGCAAGCAGGACATAGAGGACACGTTCGACGTGCCATTCAGGATGTGTGTGAAGGAAGGGAATGTGGCGAGTGTCATGTGTTCGTATAATCAGGTGAATGGTAAACCAACGTGCGCTGACCCCAACCTGCTGAAGCGAACAGTTCGTGGCCAATGGCATCTTAATGGCTACATTGTCTCCGACTGTGATTCCGTCGGCGTCTTCTTCTCCAACCAACATTATACTTCAACCCCCGAGGAGGCTGCCGCCGATGCCATCAGAGCAGGTTTGGATTTGGACTGTGGCCCTTTCCTTGCACAGTACACTCAGGGCGCCGTCAACAAGGGCTTGCTCACCGAAGCTGATGTCAACGGTGCCCTCGTTAATACCCTAACTGTCCAAATGAGACTGGGCATGTTCGACGGAGAACCATCGGCTCAGCCGTATGGCCACTTGGGTCCAAAAGATGTGTGCACCCCTGCGCACCAGGATCTTGCCCTCCAAGCTGCCACCCAAGGAATCGTGCTCCTTAAGAATGATGGTCCTACTTTGCCCCTCTCCCCACGACGTCACCGCACCGTGGCTGTCATTGGTCCCAATTCTAATGTCACCGTTACCATGATCGGTAACTATGCAGGTATTGCTTGCGGATACACCAGCCCTTTGCAAGGAATAGGGAAATATGCGACGACTATTCACCAGCTAGGTTGTGTGAATGTGGCTTGTGCTGATGACAAACAGTTTGGAGGTGCTTCAGACGCAGCGCGTCAAGCCGACGCAACGGTTCTAGTGATGGGCCTAGATCAGTCCATTGAGGCTGAAACCGTTGACAGGACCGGCTTGCTTCTGCCCGGCCATCAGCAAGACCTCGTATCAAAGGTGGCGGCAGCCTCTAAGGGCCCAACTATTTTGGTCTTGATGTCCGGCGGCCCCGTTGATGTCACTTTCGCCAAGAACGATCCACATGTTGCTGCCATCTTGTGGGCTGGCTATCCAGGCCAAGCCGGTGGTGCCGCCATTGCCGATATCTTGTTTGGAACTGCAAACCCAGGTGGCAAGCTGCCAATGACATGGTATCCACAAGGTTACCTCACCAACTTGCCGATGACAGACATGGCAATGAGGGCAAGCCGATCCAGTGGATATCCGGGAAGAACTTACAGATTTTACAAAGGGCCGGTTGTGTACGAGTTTGGTTACGGATTAAGCTACACCCAATTTGTTCACACATTGGCTAGAGCGCCGATGGTGGTGTCGGTTCCGGTGGATGGGCACCGCCGTGGGAATAACACCAACATTTCAAACAAGGCAATTAGAGTTACGCATGCAAGGTGCGGGAAGCTGTCCGTAAGCCTCCACGTGGATGTTAAGAATGTTGGGTCCAGGGACGGCATTCACACGTTGTTAGTATACTCGGCACCACCTGCGGGCGGACAATGGGCACCGCACAAGCAACTGGTGGCCTTCGAGAAAGTGCACGTTCCTGCCAAAGCTCAGCAACGAGTGAGACTCAATATTCACGTGTGCAAATTGCTGAGTGTAGTAGACAGTTCTGGGATTAGGAGAATTCCCATGGGTGATCATAGTCTTCACATTGGCGATGTCAAACACTCCATTTCGCTTCGAGCACAAACACTCGGGATTATCAAGACCTGA 2823 0.5246 MLEHPQQLVVDFHSAVNQRRPTPLPADQNLQTNNIYLMLPMRRGKPLGLNAQDSRRFLLILNSKSLLPRSTRRFLPWLARMCHHPNAVEAGHHLRPKKPQISENEETAEMCRDVFPENIERPEYLSRQTQKRTCRELSVLYFKCRIVLWSLHQLPLNPVIHQFLKAFPNPIMASFSCILSISLMLLAVMGGEGRDPFACDPKVANTSTLPFCLTSLSTTARVKDLIGRLTLPEKVKLLVNNAAGLPRLGIKGYEWWSEALHGVANVGPGTKFAGPFPGATSFPQVITTAASFNASLWEAIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPFVAGRYAAHYVRGLQGTDANRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEDTFDVPFRMCVKEGNVASVMCSYNQVNGKPTCADPNLLKRTVRGQWHLNGYIVSDCDSVGVFFSNQHYTSTPEEAAADAIRAGLDLDCGPFLAQYTQGAVNKGLLTEADVNGALVNTLTVQMRLGMFDGEPSAQPYGHLGPKDVCTPAHQDLALQAATQGIVLLKNDGPTLPLSPRRHRTVAVIGPNSNVTVTMIGNYAGIACGYTSPLQGIGKYATTIHQLGCVNVACADDKQFGGASDAARQADATVLVMGLDQSIEAETVDRTGLLLPGHQQDLVSKVAAASKGPTILVLMSGGPVDVTFAKNDPHVAAILWAGYPGQAGGAAIADILFGTANPGGKLPMTWYPQGYLTNLPMTDMAMRASRSSGYPGRTYRFYKGPVVYEFGYGLSYTQFVHTLARAPMVVSVPVDGHRRGNNTNISNKAIRVTHARCGKLSVSLHVDVKNVGSRDGIHTLLVYSAPPAGGQWAPHKQLVAFEKVHVPAKAQQRVRLNIHVCKLLSVVDSSGIRRIPMGDHSLHIGDVKHSISLRAQTLGIIKT 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2039 940 Gene3D Immunoglobulins 817 938 IPR013783 -
Lele14g2039 940 Pfam PADRE domain 1 132 IPR025322 -
Lele14g2039 940 PRINTS Glycosyl hydrolase family 3 signature 369 385 IPR001764 GO:0004553|GO:0005975
Lele14g2039 940 PRINTS Glycosyl hydrolase family 3 signature 443 461 IPR001764 GO:0004553|GO:0005975
Lele14g2039 940 PRINTS Glycosyl hydrolase family 3 signature 282 301 IPR001764 GO:0004553|GO:0005975
Lele14g2039 940 Pfam Glycosyl hydrolase family 3 C-terminal domain 563 793 IPR002772 GO:0004553|GO:0005975
Lele14g2039 940 SMART Fn3_like_2 855 925 IPR026891 -
Lele14g2039 940 FunFam probable beta-D-xylosidase 2 548 794 - -
Lele14g2039 940 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 563 796 IPR036881 GO:0004553|GO:0005975
Lele14g2039 940 FunFam Probable beta-D-xylosidase 2 818 937 - -
Lele14g2039 940 FunFam probable beta-D-xylosidase 7 221 535 - -
Lele14g2039 940 Pfam Glycosyl hydrolase family 3 N terminal domain 278 518 IPR001764 GO:0004553|GO:0005975
Lele14g2039 940 SUPERFAMILY (Trans)glycosidases 209 562 IPR017853 -
Lele14g2039 940 Gene3D - 221 537 IPR036962 GO:0004553|GO:0005975
Lele14g2039 940 PANTHER SUGAR HYDROLASE-RELATED 182 928 IPR044993 GO:0009044|GO:0045493
Lele14g2039 940 Pfam Fibronectin type III-like domain 856 923 IPR026891 -
Lele14g2039 940 Gene3D - 548 794 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2039 Lele-ChrLele14 26318213 26325342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2039 151 940 Glycoside Hydrolase AT1G02640 71.772 0.0 1175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0170 06 1039531 1041936 Lele14g2039 14 26318213 26325342 CCT
Lele07g0370 07 2093054 2095413 Lele14g2039 14 26318213 26325342 CCT
Lele08g0174 08 1085452 1087857 Lele14g2039 14 26318213 26325342 CCT
Lele05g0351 05 2012306 2017464 Lele14g2039 14 26318213 26325342 CCT
Lele14g2039 14 26318213 26325342 Lele16g0310 16 1727790 1730378 hybridization