Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2036 ATGTTGCAAACAAGTTTTCCATCGCAAGTGTTTCTCAATGTTCATTTTGTTCTCTATGGTTTAGATCCTACCAACGAAAGCAAGGTCCGATTCAAGCTTGTAAACGGCGGTGGAGTTGATGTTGGTCAGTACGGTCCAAGTTGCACACATGTTGTCGTGGGTAAACTTACATATGACGATCCTATTTGCGTTGCTGCAAGAAATGATGGGAAGACGCTCGTCACTGCTTTGTGGGTTGATCATAGTGTTGATATTGGAATGCCAGTTGATGCAACCTCCGTCATGTACAGTCCCTTGAAAGATTTAAATGGTATACCGGGTGCTAAGAATTTGGTTGTTTGCTTGACTGGTTATCAACGTCAGGATCGGGATGACATTATGACAATGGTTGGCCTGATGGGAGCTGAATTTTCTAAGCCATTGGTGGCAAGCAAAATTACTCATCTTGTATGCTACAAATTTGAAGGAGAAAAGTACGAGCTTGCCAGTAGACTGCAGACAATTAAGTTAGTTAATCATCGGTGGTTGGAAGACTGTTTGAAGGATTGGACGCTTCTCCCTGAAGAAAAATATAAGAAGAGTGGTTATGAACTAGAGACGATGGCAGAAGAGGCTAAAGACTCTGAAGAAGAAGCTGAAGATCTCATGCCAGGGAAATCTAGGAGAAGAAATATAACCAAGAGTCCCTTTAGTTCAAAAATTGATACTGCCACAACCCATAACTCATCAAGACCTGTAATAGTAGAATCAAATGCCTTTCCTGGTTCTGCTGCTCCTGAGGGATTGTGGGAAGCAAATGAGGGGCATGAGTCCTTATTAATTCTAAAAAATGAGAATAGATCTGATCAAACCAGAAGCATCCATCATGATGTTCTAAAATCAAGTTCTGGAGATCATGGCGTTTCTAGGCATGATGCATCTGGTCAGCTTATCAACACATGTGCCAAGACTACTAAACCTAAAAACTCTTGTGTTCCAGAAGCGGTTGACTGCCAGAATCTTGGCATTCGTGGAAATGCCGATTCATCGGGTCATCTTCCTGATGTGCAGGCTGGTACATCGGAGTATGGGATGTTGGTTAATGACTTGAGATTGACTTCTGAAAGTGTTGAAGGACATGTACACTCAGATGCAAAGGGTAGTGCTGCAAGTAACTCTAGGAAAAACTTGAGATTTTCTCCTCCAAGTGGCTTAAATGAAAACCTTGGCAATTTAAGGGATCCTTCTGCAGCACCTTTAAATAATTTGAAATTAAGAAACGACCTAGAAGCCTCTTCGAGCAAGGTGGAAAAGGCAATTGACAGCATCAACTTCGCCTTTGTTGAAGGTTATGGAAAGGGAAATGATTTTAGTAACAAGAAAGGGCCAAGTAGTTTGTTACCTAAAAAGAGGACGATTGAAGCTCCTACTAAATTTAAATCGAAGAAGACGACAGATGCAAAACTTTCCATTGAAAGATCCCCATTAGCGGATAGCAATAAACTACCAGAGATAGAACACCATTTTCCTGTGGGAAGAGATGATATAAAGGACCCAGAAACTTTGAGCTCAAAGTCTCTGCAAGATGATGATGCACCCAAAATTAATGGCAAGCCTGATATTGCAGGTTTTGGCAGGGAAGAAGTTGCTCAAGATGGCGATGAAACAGAACCTCATAATGGCAGGAGCGATCTTGAATGCTCATATTCCAGTAAAAAGAAGTCTAGAAATGATGGATCAACTGGTCGTGCTACCCTGGATTTATGCAACAAAGTAAGTGATAAGTTGATTAGAAAATCACCCCACAAGAAGACAGTTGCCAAGAAATGTTTGGGTTCTAGACCTAAATCAGGCGCTACTGCTAAAAAGAAGGGTTTGATTTCATTAAATGAAAGTACCCTTCAAGCTGATGGTGCAGGTGGTTTAAGTGTATGTAAAGAGACGGCAGTTTGTGATGGAAAGAAGCTTCATAAATCCTCTAAAATTGTTAGTGTTGCAACGTCAATGGAGCAGGATAGTATCTGTAAATCTGCAGAAAATGCCAATGGCAGAGAATTTCAGGATGAAGAAACAGAGTCTCTGGGTGACAAATCTGAGTACAAGGGACTGGCAGTTGATGAAGACAATTGTGAATCAATTAATCTTTTGAGAAAATCTGTTGCACAGACAGAAGAGAAGTTGGAAGCAACTCACCATGCATCAAAATCTAAATCAAAGCCTCCAAAGGAAGGTACAGATGGAACTACACCAGTGGTACATGAGCCGGTAGACTCAACCTCTAAAGTAAAAGGAAAGCCTAAAGGGAGAAAACTTACTGAAGGTAGAACCAAGAAAGCCACATTTACCAAGGATATAAAGAGGCCTGACAAGGCTGCATCCAGTGAGAGGAAAGATGAGACAAATATGGAAAGCATGGAAACAGTTTTATTTCCTGCTGGTAAAAATAGCAGCTCAGCTGCACTGACAAATAATGCAGGGAGTTTTCAGGAAGTTGAGAAGGAAAACAGACCAATTGATGGAGAGGGCATTGGGGAGGGTATAAACATTGAAAATTCAGTTCTTAAAAATAGTGCAGGTCAAGCAAAGATCAATCAGAAGACTCAAAAAAAAGCTCTTAATTCATCTATATCAGAACATAACAAAATATTGAAAAGAGAAGCTGCATGTTTTATAGTAAGTGGTCATCGCTTACAGAGAAAGGAGTTTCAACAAATGATTAGGCGATTGAAAGGAAGGGTCTGCCGGGATTCTCATCAGTGGTCATATCAGGCAACACACTTCATAGCCCCGGATCCTATACGCAGGACTGAGAAATTTTTTGCTGCTGCTGCATCAGGGAGGTGGATTCTTAAAACTGATTACATAACTGCATGTAGTCAGGCCGGTAAATTCTTGGCAGAAGAACCTTATGAGTGGCACAAGCGTGGCCTTAACGAGGATGGTGCAATCAATTTGGAGGCTCCGAGAAGATGGCGGCTTTTGAAAGAGAAGACAGGTCATGGGGTCTTGTACGGAATGCGCATTATTGTATATGGCGATTGCATTGTCCCACCTTTGGATACACTGAAGCGTGTAGTCAAAGCAGGAGATGGAACTATATTAGCAACTTCTCCTCCTTACACCCGGTTCCTTGATACCGGTGTTGACTACGCCATAGTTAGCCCGGGCCTGCCACGTGTTGACACGTGGGTCCAAGAATTCTTAAAACACGAGATACCCTGTGTTTTAGCTGACTACTTGGTGGAGTATGTGTGCAAGCCGGGGTTTTCCCTCGAGAAGCATGTACAGTATGGGACTCATGCTTGGGCAGAGAGGTCATTTGCTAAGCTTAAAAGGAATGCGGAAGAGATAATCAAGAATCCTCCAGAAGCTAATGATGATAATGACACAGCTTGCCATGTATGTGGATCCCGAGATAGAGGAGACGTGATGCTGATTTGTGGGGATGAAAGGGGTTCCGGGGGTTGTGGAGTTGGTATCCATATCGATTGCTGCGATCCTCCTCTTAAGGAGGTTCCTGAGGAGGATTGGTTTTGTCCCAGGTGCAGTGAAACCCGAAACTGCTCCAACTCTAACAAGAAAAGGAAAAAAGGCGTCTTGTCTTCCTCCAAGAGCAAATGA 3600 0.4239 MLQTSFPSQVFLNVHFVLYGLDPTNESKVRFKLVNGGGVDVGQYGPSCTHVVVGKLTYDDPICVAARNDGKTLVTALWVDHSVDIGMPVDATSVMYSPLKDLNGIPGAKNLVVCLTGYQRQDRDDIMTMVGLMGAEFSKPLVASKITHLVCYKFEGEKYELASRLQTIKLVNHRWLEDCLKDWTLLPEEKYKKSGYELETMAEEAKDSEEEAEDLMPGKSRRRNITKSPFSSKIDTATTHNSSRPVIVESNAFPGSAAPEGLWEANEGHESLLILKNENRSDQTRSIHHDVLKSSSGDHGVSRHDASGQLINTCAKTTKPKNSCVPEAVDCQNLGIRGNADSSGHLPDVQAGTSEYGMLVNDLRLTSESVEGHVHSDAKGSAASNSRKNLRFSPPSGLNENLGNLRDPSAAPLNNLKLRNDLEASSSKVEKAIDSINFAFVEGYGKGNDFSNKKGPSSLLPKKRTIEAPTKFKSKKTTDAKLSIERSPLADSNKLPEIEHHFPVGRDDIKDPETLSSKSLQDDDAPKINGKPDIAGFGREEVAQDGDETEPHNGRSDLECSYSSKKKSRNDGSTGRATLDLCNKVSDKLIRKSPHKKTVAKKCLGSRPKSGATAKKKGLISLNESTLQADGAGGLSVCKETAVCDGKKLHKSSKIVSVATSMEQDSICKSAENANGREFQDEETESLGDKSEYKGLAVDEDNCESINLLRKSVAQTEEKLEATHHASKSKSKPPKEGTDGTTPVVHEPVDSTSKVKGKPKGRKLTEGRTKKATFTKDIKRPDKAASSERKDETNMESMETVLFPAGKNSSSAALTNNAGSFQEVEKENRPIDGEGIGEGINIENSVLKNSAGQAKINQKTQKKALNSSISEHNKILKREAACFIVSGHRLQRKEFQQMIRRLKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKTDYITACSQAGKFLAEEPYEWHKRGLNEDGAINLEAPRRWRLLKEKTGHGVLYGMRIIVYGDCIVPPLDTLKRVVKAGDGTILATSPPYTRFLDTGVDYAIVSPGLPRVDTWVQEFLKHEIPCVLADYLVEYVCKPGFSLEKHVQYGTHAWAERSFAKLKRNAEEIIKNPPEANDDNDTACHVCGSRDRGDVMLICGDERGSGGCGVGIHIDCCDPPLKEVPEEDWFCPRCSETRNCSNSNKKRKKGVLSSSKSK 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2036 1199 MobiDBLite consensus disorder prediction 466 482 - -
Lele14g2036 1199 SMART BRCT_7 106 183 IPR001357 -
Lele14g2036 1199 SMART BRCT_7 873 955 IPR001357 -
Lele14g2036 1199 SMART BRCT_7 993 1080 IPR001357 -
Lele14g2036 1199 SMART BRCT_7 8 86 IPR001357 -
Lele14g2036 1199 Gene3D BRCT domain 99 224 IPR036420 -
Lele14g2036 1199 SUPERFAMILY FYVE/PHD zinc finger 1102 1176 IPR011011 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 379 403 - -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 492 529 - -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 751 795 - -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 593 617 - -
Lele14g2036 1199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1087 1191 IPR013083 -
Lele14g2036 1199 ProSiteProfiles BRCT domain profile. 109 193 IPR001357 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 716 795 - -
Lele14g2036 1199 Gene3D BRCT domain 993 1086 IPR036420 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 675 696 - -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 669 696 - -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 1178 1199 - -
Lele14g2036 1199 SUPERFAMILY BRCT domain 883 985 IPR036420 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 716 735 - -
Lele14g2036 1199 Gene3D BRCT domain 876 991 IPR036420 -
Lele14g2036 1199 SUPERFAMILY BRCT domain 109 192 IPR036420 -
Lele14g2036 1199 CDD BRCT_TopBP1_rpt7 882 955 - -
Lele14g2036 1199 SMART PHD_3 1124 1176 IPR001965 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 372 406 - -
Lele14g2036 1199 Pfam PHD-finger 1125 1177 IPR019787 -
Lele14g2036 1199 Pfam twin BRCT domain 111 175 IPR001357 -
Lele14g2036 1199 ProSiteProfiles BRCT domain profile. 871 965 IPR001357 -
Lele14g2036 1199 ProSiteProfiles Zinc finger PHD-type profile. 1122 1178 IPR019787 -
Lele14g2036 1199 Pfam BRCA1 C Terminus (BRCT) domain 885 951 IPR001357 -
Lele14g2036 1199 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 754 1190 IPR044254 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 538 573 - -
Lele14g2036 1199 Gene3D BRCT domain 1 95 IPR036420 -
Lele14g2036 1199 SUPERFAMILY BRCT domain 7 92 IPR036420 -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 202 226 - -
Lele14g2036 1199 MobiDBLite consensus disorder prediction 450 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2036 Lele-ChrLele14 26296954 26303230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2036 129 214 Core DNA Replication Machinery Family AT4G02110 72.093 5.29e-35 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele14g2036 BRCT 1.5e-07 CL0459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2036 14 26296954 26303230 Lele16g0312 16 1749344 1755619 hybridization