Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2017 ATGTGTGGGGGTGCTATCATCGCTGACTTCATTCCTCGCCACCGTGGTCGCCGCCTTACCCCCTCCGACATCTGGCCTGACACCCTTGGCAACCACAATGACTTCCCCTCGGAGTTTTCTCACCCAGTTCCCCTCCAAAACCCTCGACTTTCCACAGTAGCTGAGCAGGTTGAGAAGCCCCCCAAGAGGCAGAGGAAGAATCTGTACAGAGGGATTCGGCAGCGTCCGTGGGGTAAATGGGCTGCGGAGATTCGTGATCCGAGGAAAGGAGTTCGTGTTTGGCTCGGCACTTACAACACTGCGGAAGAAGCTGCCAGGGCCTATGACAGAGAAGCTCGTAAAATCCGCGGCAAGAAAGCCAAGGTCAATTTTCCCAACGAAGGCGAGGATAGCTCCATCCAAGCTCGTCGCAACCCACCACCTCCACCTCAACGCTCCGACGGTGCCCCGAGAAGTCTGAATCTGGAGTTCGGTTACGATCTGAACCAAGCCGAGGCAATTTGTTCTCCCTGGGGGGCAGTGTCAGGGTCAGAGGGTGGGTACTCGACGATGGAGTTGTTGGAGTCGAATCAGAGAATGGGGAGCGAGGGAGGGAAGACGAAGAAGGTGGGCACAGAAGGGGAGGAAGAAGAAAACCAAGTAGGGGAGCTGTCGGAGGAGCTGATGGCGTACGAGAATTACATGAAGTTTTATCAGATTCCATACTACGACGGCCAATCGGCGACACGGAATAGCGTTCAGGAGAACGTGGTGGGTGACCCGTGGAACTTCGACGATGAAGGCATTCCGGCATGCGCGACGTCGTCCGCCATGTGA 816 0.5613 MCGGAIIADFIPRHRGRRLTPSDIWPDTLGNHNDFPSEFSHPVPLQNPRLSTVAEQVEKPPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTYNTAEEAARAYDREARKIRGKKAKVNFPNEGEDSSIQARRNPPPPPQRSDGAPRSLNLEFGYDLNQAEAICSPWGAVSGSEGGYSTMELLESNQRMGSEGGKTKKVGTEGEEEENQVGELSEELMAYENYMKFYQIPYYDGQSATRNSVQENVVGDPWNFDDEGIPACATSSAM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2017 271 PANTHER DNA-BINDING DOMAIN 53 189 IPR044808 GO:0003700|GO:0009873
Lele14g2017 271 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Lele14g2017 271 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Lele14g2017 271 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Lele14g2017 271 MobiDBLite consensus disorder prediction 192 214 - -
Lele14g2017 271 Pfam AP2 domain 69 117 IPR001471 GO:0003700|GO:0006355
Lele14g2017 271 FunFam Ethylene-responsive transcription factor 2 67 126 - -
Lele14g2017 271 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Lele14g2017 271 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Lele14g2017 271 CDD AP2 69 126 IPR001471 GO:0003700|GO:0006355
Lele14g2017 271 MobiDBLite consensus disorder prediction 119 153 - -
Lele14g2017 271 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2017 Lele-ChrLele14 26187906 26188813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2017 1 126 AP2-EREBP Transcription Factor Family AT3G16770 56.618 3.52e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g2017 AP2 7.4e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2017 14 26187906 26188813 Lele15g0320 15 1806615 1810507 hybridization
Lele14g2017 14 26187906 26188813 Lele16g0331 16 1853596 1857372 hybridization