Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2012 ATGAAACTAGCCATTTTCAAGCCCATCACATCTAAGATCTTCTCTTCTTCATATCCCAATATGGCTTTCAAGCTAACGTCTCTTGTTAGTTTTACACGCCCCGTTTTCCTTCTGCTTTCCTTCTTCGCATTGTTATCTGTAGCAGATAACCCTATGGCCTCCCTCATAACCTCTGCATCATCAGACACAGTTTGTGACTCCACCTTGCACCCTGCCCTTTGCAAAACTGTGCTCGGTAATCAAAACGGCAACGTCTTTGACTTTGGCCGCATATTTCTTCGAAAGTCCTTATCTCAGTCTCGTAGATTCTTGAACAAGGTCGATTCCCTCCTGAAATCTCAATCCTCTCTGTCTCAGCCCACCATTCGAGCTCTCGAGGACTGTCGCTTCCTCGCCGAGCTCAACTTCGAGTTCTTATCAAACACCTTGAATGCTGTGAACAACCTTAATGATTTCCTATCTTCCTCTAAAGCCGAAGACCTTGAAACCTTGTTCAGTGCCGTTCTGACCAACCAGCAAACATGTCAGGATGGCCTAGAAACGACAGCTTCGGATCGAAGAGTAAAGGACGATCTCTCTTCCTCGCTCTCTGACGACACCAATCTTCTCAGCGTGTCTCTTGCTCTCTTCGCCAAAGGTTGGGTGCCCGAGAAGAAAATCGTAACATCATGGCCACGCAATGGGGTGCATTTGGATTTCAGTAATGGTCGTTTGCCATTGGACATGTCACCTCGGGTTAAGGCCATTTTCGACAACGCAAGACGCCACGGCAGGAAACTGCTCCAGTCCGGTGACCAAAGTGTGAAGGTGACCGACATCGTGGTTGTCAGTCAGGATGGAAGCGGAAACTTCACCACCATCAACGACGCCATCAATGCTGCCCCTAACAACACAGCTTCCGGTGTCGGTTACTTCTTGATCTTCATCACCGAGGGTGTGTACCAAGAATACGTATCCATACCCAAACAGAAGAAGTACTTGATGTTAGTGGGAGACGGCATCAACCGCACCGTCATCACCGGAGACCACAACGTCGTCGACGGTTCTACAACATTCAACTCAGCGACATTTGCCGTGGTGGCAGAAGGATTCGTGGCAGTGAACATGACATTCCGTAACACGGCGGGGCCGAGCAAGCACCAAGCCGTTGCGTTGAGAAGCGGAGCGGACCTGTCCACGTTCTACAGCTGCAGCTTCGAAGGGTACCAAGACACTCTGTACACACATTCTCTGAGGCAATTCTACAGAGAATGCGACATATACGGCACCGTGGACTTCATATTCGGGAACGCGGCAGTGGTTCTGCAAAACTGCAACCTGTATGCCCGGCTTCCGTTGAGCGGTCAGTTCAACGCTATCACGGCTCAGGGTCGAACGGACCCGAATCAGAACACAGGCACGTCGATACAGAACTCGACCATAAAAGCAGCCGACGATTTGGCTCCGTCAGTAGGGTCGGTGAACACGTACCTGGGGAGGCCGTGGAAGGAATACTCGAGAACGGTGTTCATGGAGTCATGGATGGACAGTCTGATCAATCCTGCAGGTTGGAGGGAATGGAGCGGCGACTTTGCTTTGAGCACGTTGTACTACGCAGAGTATAACAACAGTGGGCCGGGGGCTGGCACGAGCAACAGGGTGAAGTGGCCGGGTTACCACGTCATCAATGCCACTGATGCGGCTAATTTCACGGTGTCCAACATCTTGACTGGGAATGCTTGGTTGCCTCAAACTGGAGTTCCATACTCTCCGGGACTTGCGTCCTGA 1767 0.5093 MKLAIFKPITSKIFSSSYPNMAFKLTSLVSFTRPVFLLLSFFALLSVADNPMASLITSASSDTVCDSTLHPALCKTVLGNQNGNVFDFGRIFLRKSLSQSRRFLNKVDSLLKSQSSLSQPTIRALEDCRFLAELNFEFLSNTLNAVNNLNDFLSSSKAEDLETLFSAVLTNQQTCQDGLETTASDRRVKDDLSSSLSDDTNLLSVSLALFAKGWVPEKKIVTSWPRNGVHLDFSNGRLPLDMSPRVKAIFDNARRHGRKLLQSGDQSVKVTDIVVVSQDGSGNFTTINDAINAAPNNTASGVGYFLIFITEGVYQEYVSIPKQKKYLMLVGDGINRTVITGDHNVVDGSTTFNSATFAVVAEGFVAVNMTFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYARLPLSGQFNAITAQGRTDPNQNTGTSIQNSTIKAADDLAPSVGSVNTYLGRPWKEYSRTVFMESWMDSLINPAGWREWSGDFALSTLYYAEYNNSGPGAGTSNRVKWPGYHVINATDAANFTVSNILTGNAWLPQTGVPYSPGLAS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2012 588 Pfam Pectinesterase 274 572 IPR000070 GO:0030599|GO:0042545
Lele14g2012 588 SMART PMEI_2 56 209 IPR006501 GO:0004857
Lele14g2012 588 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 210 IPR006501 GO:0004857
Lele14g2012 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 211 IPR035513 -
Lele14g2012 588 FunFam Pectinesterase 267 586 - -
Lele14g2012 588 PANTHER PECTINESTERASE 44 576 - -
Lele14g2012 588 CDD PMEI-like_3 63 214 - -
Lele14g2012 588 FunFam Pectinesterase 62 212 - -
Lele14g2012 588 Pfam Plant invertase/pectin methylesterase inhibitor 62 209 IPR006501 GO:0004857
Lele14g2012 588 Gene3D - 267 586 IPR012334 -
Lele14g2012 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 212 IPR035513 -
Lele14g2012 588 SUPERFAMILY Pectin lyase-like 272 585 IPR011050 -
Lele14g2012 588 ProSitePatterns Pectinesterase signature 2. 420 429 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2012 Lele-ChrLele14 26160919 26162777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2012 34 588 Carbohydrate Esterase AT1G02810 59.348 0.0 674